Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1351 ATGGCTTCTTCTACTGCTTCAGCCCCTGCTTTGAAGCGCACGAACTCGATTGCAGACAACATGCCTGATGCATTGCGTCAGAGTAGGTACCATATGAAGAAGTGCTTTGCTAAGTACCTTGAGAAGGGAAGAAGGATCATGAAGCTTCACCATTTGATGGAGGAAATGGAGCAAGTAATTGATGACAACGCCGAGAGGAACCAAGTCTTGGAGGGCAATCTTGGCTACGTATTGGGTTCTACACAGGAAGCTATTGTTAGTCCACCATATGTTGCCTTTGCAATACGGAGAAATCCTGGGGTTTGGGAATATGCTCAAGTCAGCTCTGAGAACCTCTCTGTTGTGGGAATCTCCTCCACTGACTACCTGAAATTGAAAGAATCAGTATATGATGAAAATTGGGTAAATGATGAAAACGCATTTGAAGCAGATTTTGGAGCATATGACTTCCCTATTCCACATTTAAACCTGTCTTCTTCAATTGGAAAAGGAATGAATTTTGCTTCAAAGTTCTTATCTTCAAAGCTAAGTGGGAAAGTGGAAAAAACACAAGCTCTAGTGGACTACTTGTCAACTCTAAGTCATGGTGGACAAAAATTGATGATAAATGACACCCTGAACTCTGCTGCAAAGCTTCAGCTGGCACTAATAGTGGCTGACGTGTTCCTTGCCGGACTACCTAAGGACACTCCATATCAGAATTTTGAGCTAAGGTTCAAGGAGTGGGGTTTTGAGAGAGGCTGGGGTGATACTGCAGAAAGAGTGAAGGAGACAATGAACTTTCTGGCTGAAGTACTCCAAGCACCGGACCCGAAGAATCTCGGGAAGTTTTTTAGCAGAATTCCCACAATTTTCAATGTGGTGATCTTCTCTGTTCATGGTTATTTTGGACAAGCTGATGTCCTTGGCTTGCCAGACACCGGTGGTCAGGTAGTTTACATCTTGGATCAAGTAAGAGCTTTGGAAGCAGAGTTGCTTCTCAGAATTAAGCAGCAAGGGCTAACTGTGAAGCCTCAAATTCTTGTTGTTACAAGGCTCATACCTGATGCTAGAGGAACCAAATGTGATCAAGAGTTAGAACCAATCATCGATGCCAAACACTCCCACATTCTTCGTGTTCCTTTCGTCACAGAAAAAGGAGTCCTTCGTCAATGGGTTTCTCGCTTTGACATTTATCCATATCTTGAGAGGTTTACTCAGGATGCTACAACAAAGATTCTAGACCACCTTGAAGGGAAACCGGATCTTGTTATTGGAAACTACACTGATGGGAATTTGGTAGCATCTCTTATGGCTAACAAACTTGGGATAACCCTGGGAACTATAGCTCATGCTTTGGAGAAGACAAAGTATGAAGATTCAGATGTCAAGTGGAAGGAGCTTGATCCCAAGTATCATTTCTCATGCCAATTCATGGCAGATACAATTGCAATGAATGCAGCTGATTTCATCATCACCAGCACATACCAGGAAATTGCTGGAAACAAAGATAGACCTGGGCAGTATGAAAGCCATGCCGCGTTTACACTTCCAGGGCTTTGTAGGGTTGTATCAGGAATAAACGTATTTGATCCCAAATTCAACATAGCTGCACCTGGAGCTGACCAGTCTGTGTATTTCCCTTATACAGACAAAGACCAAAGACTAGCTCAATTTCACCCTGCCATTGAAGAGTTACTTTATGGTAAAGCAGATAACGATGAGCATATTGGATCATTATCAGACAGGAGAAAACCTATCATCTTCTCAATGGCAAGGCTTGATGTTGTGAAGAACTTAACTGGGTTGGTTGAGTGGTATGGGAAGACCAAGAGATTGAGAAACTTGGTAAACCTTGTCATAGTTGGAGGCTTCTTTGACCCTTCAAAATCCAAAGACAGAGAGGAAATGGCAGAAATAACAAAGATGCACTCTTTAATTAATAAGTACCAGCTAAGGGGTCAATTCAGATGGATTGCTGCACAGACTAACCGACATCGCAACGGTGAACTCTACCGATGCGTTGCTGACACCAAGGGAGCTTTTGTTCAGCCTGCTTTATATGAAGCATTTGGACTTACTGTCATTGAAGCAATGAACTGTGGCTTGCCCACTTTTGCTACAAATCAAGGAGGCCCAGCTGAGATTATAGTTGATGGAATCTCCGGATTCCATATTGATCCCTTACACGGCGACGAATCAAGCAACAAAATCGCTGATTTCTTTGAGACTTGCAAAGTGGATCCAACACACTGGAGCAAGATTTCATCTGCCGGGTTGAGGCGCATAAATGAATGCTACACTTGGGAGATTTATGCAAATAGGCTACTGAACATGGGAAGCATGTACACTTTCTGGAGGGCAGTGAATAAGGAGCAAAAAGAAGCAAAACAAAGATACATCCATATGTTTTATAACCTCATGTTCAAGGATTTGGTGAAGACTGTACCTCTCCCAAGTGATGAACCTCAAAAACCAGTTACCAAGCAGCAGACTGTTAAACAACAGGGCACAAGACGAGTACAATCCACATTGTCAAGGTTACTTGGAGCTTGA 2535 0.4288 MASSTASAPALKRTNSIADNMPDALRQSRYHMKKCFAKYLEKGRRIMKLHHLMEEMEQVIDDNAERNQVLEGNLGYVLGSTQEAIVSPPYVAFAIRRNPGVWEYAQVSSENLSVVGISSTDYLKLKESVYDENWVNDENAFEADFGAYDFPIPHLNLSSSIGKGMNFASKFLSSKLSGKVEKTQALVDYLSTLSHGGQKLMINDTLNSAAKLQLALIVADVFLAGLPKDTPYQNFELRFKEWGFERGWGDTAERVKETMNFLAEVLQAPDPKNLGKFFSRIPTIFNVVIFSVHGYFGQADVLGLPDTGGQVVYILDQVRALEAELLLRIKQQGLTVKPQILVVTRLIPDARGTKCDQELEPIIDAKHSHILRVPFVTEKGVLRQWVSRFDIYPYLERFTQDATTKILDHLEGKPDLVIGNYTDGNLVASLMANKLGITLGTIAHALEKTKYEDSDVKWKELDPKYHFSCQFMADTIAMNAADFIITSTYQEIAGNKDRPGQYESHAAFTLPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTDKDQRLAQFHPAIEELLYGKADNDEHIGSLSDRRKPIIFSMARLDVVKNLTGLVEWYGKTKRLRNLVNLVIVGGFFDPSKSKDREEMAEITKMHSLINKYQLRGQFRWIAAQTNRHRNGELYRCVADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGISGFHIDPLHGDESSNKIADFFETCKVDPTHWSKISSAGLRRINECYTWEIYANRLLNMGSMYTFWRAVNKEQKEAKQRYIHMFYNLMFKDLVKTVPLPSDEPQKPVTKQQTVKQQGTRRVQSTLSRLLGA 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1351 844 FunFam Sucrose synthase 535 762 - -
Lele25g1351 844 FunFam Sucrose synthase 16 153 - -
Lele25g1351 844 Gene3D - 15 153 - -
Lele25g1351 844 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 304 771 - -
Lele25g1351 844 TIGRFAM sucr_synth: sucrose synthase 30 810 IPR012820 GO:0005985|GO:0016157
Lele25g1351 844 Gene3D - 154 283 - -
Lele25g1351 844 Gene3D Glycogen Phosphorylase B; 535 762 - -
Lele25g1351 844 Pfam Sucrose synthase 13 561 IPR000368 GO:0005985|GO:0016157
Lele25g1351 844 Pfam Glycosyl transferases group 1 572 736 IPR001296 GO:0016757
Lele25g1351 844 FunFam Sucrose synthase 154 283 - -
Lele25g1351 844 Coils Coil 53 73 - -
Lele25g1351 844 Gene3D Glycogen Phosphorylase B; 288 805 - -
Lele25g1351 844 PANTHER - 11 814 IPR012820 GO:0005985|GO:0016157
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1351 Lele-ChrLele25 9324539 9330522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1351 9 815 Glycosyltransferase AT4G02280 56.877 0.0 982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1351 25 9324539 9330522 Lele25g1351 25 9324539 9330522 ECH
Lele25g1351 25 9324539 9330522 Lele27g0734 27 15466983 15472952 hybridization