Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1163 ATGGCCCCGCTATCTTTATGGCGCTCTGGGACGAGGCTTGCTCTGACTGCCTCCACCATTGGCGGCGGTGCCGCCGCGGCCGCTATAGCCACCTCTGATGACCCTGCAGCTACCCTCAAGCTTTGCACCACCGTCCCTCATCGACTCATCCGCGATGCCATCACCGCTGCCAACATTGCGTTCGATTATGAATATTCTCTTTGGGGACTGCCGGAAGGAAGTAACGAGCGGTCAAAAGTCAAGCACGAAGTTCACCTCCGCTCTGCACGTAAACTTCAAGAACTGTGTTTTAAGAACGGAGGGGTTTATATAAAGCTTGGCCAACATATCGGGCAGCTGGAATACTTAATTCCTCAAGAATATGTTCAGACAATGAGGGAGTCCATGTTGAATAAATGTCCAGTTTCTTCATATGATCAAGTATGCGATGTCTTTAAGAAAGAACTTGGAGAAACACCCGATAGAATATTTTCTGAATTTGATCCAGTTCCAATAGCAAGTGCTTCCCTTGCCCAAGTTCATATAGCCCGCACCCATGATGGCCAAAAAGTTGCTGTGAAGGTTCAACATACTCACATGACTGATACTGCGGCTGCAGATCAAGCTGCTGTGGAATTGGTTGTGAACACTTTGCACAGGATTTTCCCCAGTGTTGATTATAGATGGTTGGTTGATGAGATACGGGAAAGTTTACCTAAGGAATTGGACTTTCTGATTGAGGCAAAGAATAGTGAGAAATGTTTGGAGAACTTCCGGAAGTTTTCTCCTCATATTGCAAACTATATATATGCACCAAAAATGTATTGGAATCTAAGCACCTCGAAGTTACTAACAATGGAATTCATGGATGGTGTCCAAATAAATGATGTAAAGGCCATTAGAAGATTTGGGATCCATCCACGTGAAGTTTCAACATTGGTCAGTCAAACTTTTGCTGAAATGATGTTCAAGCATGGATTTGTGCATTGTGATCCTCATGCTGCTAACCTACTGGTTCGTCCATTGCCTTCTAGCAGAATGAACATCCTGGGCAGGAGGAAGCCACAGTTGATTCTTTTAGACCATGGACTTTATAAAGAGCTTGATTTCCATACAAGAACCAATTATGCTTCCCTATGGAAGGCATTGGTATTTTCTGATGCTAAGGCAATAAAGGAGTATAGTGCAAAATTAGGTGCTGGAGAGGATTTATATGCACTATTTGCCGGAGTTCTAACCATGAGACCGTGGAATAGAATTGTTGACCGAGCTGTGGATCATTTAGTCATACAGGGAAGTGAGAGTGAGAGATCAGAATTGCAGATGTACGCTTCTCAATATATCCCTCAAATATCAGAGCTTCTGAGGAGATTACCACGCGTAATTCTTTTAATGCTGAAGACAAATGACTGTTTACGTGCAGTTAACAATTCTCTGTTGCAGGGATCTTCCCTAGAGACGTTTTATATCATTGGCAAGGTTTCTTCGAAGGCTGTGATTGAGGCAAAGATGTCGCAAAGCAAATCCCTTCTCACTTGGTTGAGTGTTATATTGGATGACATTTCGCTTGAACTGCGGCTCTGGGGAATGCAGATCGCTTTGTGGCTTTTACAACTCAGAAAGGCCTTGTCTTGGTCAAACCAATGA 1626 0.4373 MAPLSLWRSGTRLALTASTIGGGAAAAAIATSDDPAATLKLCTTVPHRLIRDAITAANIAFDYEYSLWGLPEGSNERSKVKHEVHLRSARKLQELCFKNGGVYIKLGQHIGQLEYLIPQEYVQTMRESMLNKCPVSSYDQVCDVFKKELGETPDRIFSEFDPVPIASASLAQVHIARTHDGQKVAVKVQHTHMTDTAAADQAAVELVVNTLHRIFPSVDYRWLVDEIRESLPKELDFLIEAKNSEKCLENFRKFSPHIANYIYAPKMYWNLSTSKLLTMEFMDGVQINDVKAIRRFGIHPREVSTLVSQTFAEMMFKHGFVHCDPHAANLLVRPLPSSRMNILGRRKPQLILLDHGLYKELDFHTRTNYASLWKALVFSDAKAIKEYSAKLGAGEDLYALFAGVLTMRPWNRIVDRAVDHLVIQGSESERSELQMYASQYIPQISELLRRLPRVILLMLKTNDCLRAVNNSLLQGSSLETFYIIGKVSSKAVIEAKMSQSKSLLTWLSVILDDISLELRLWGMQIALWLLQLRKALSWSNQ 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1163 541 SUPERFAMILY Protein kinase-like (PK-like) 134 333 IPR011009 -
Lele25g1163 541 Pfam ABC1 atypical kinase-like domain 129 387 IPR004147 -
Lele25g1163 541 PANTHER ABC1 FAMILY PROTEIN 29 514 - -
Lele25g1163 541 CDD ADCK1-like 128 392 IPR045307 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1163 Lele-ChrLele25 7556955 7568352 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1163 25 7556955 7568352 Lele25g1163 25 7556955 7568352 ECH
Lele25g1163 25 7556955 7568352 Lele27g0916 27 17112406 17121366 hybridization
Lele25g1163 25 7556955 7568352 Lele28g1154 28 7509419 7516517 hybridization