Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0964 ATGGCTGACGTACCAACCGCTCAATCCCAGTGGGAATTTAGCAGGCAACTCCCTCCCTCCCTCTGTGCTATGGCTTCAGGTGATACTCCTGAATGTAGGATTCAGTTACTTCTAAAGTACCAAAAAATTCTCAATGACTTTGAAGTGGATTTTGGGTCTGAAGAGAATGCTTCCATAGTATATGCCACCATAGCTGTTGATAAGGAGTTGCAACCAGACAAGGTAAAGCGAATTATGACAGTTTCTAACGGAAAGCTTTCAGTGCTCTTTGAGGCGACAGAAGCCAGATTTCTTCGGGCATCGTTCAGTGCTTTTGTAGATGTGCTTACCTTAGCTACAAAGACAATTGAAGAGTTTGGTCAAGGAATGGAGTTGTGA 378 0.4365 MADVPTAQSQWEFSRQLPPSLCAMASGDTPECRIQLLLKYQKILNDFEVDFGSEENASIVYATIAVDKELQPDKVKRIMTVSNGKLSVLFEATEARFLRASFSAFVDVLTLATKTIEEFGQGMEL 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0964 125 Pfam Transcription factor Pcc1 48 117 IPR015419 -
Lele25g0964 125 PANTHER EKC/KEOPS COMPLEX SUBUNIT PCC1 FAMILY MEMBER 46 121 IPR015419 -
Lele25g0964 125 FunFam L antigen family member 3 39 121 - -
Lele25g0964 125 Gene3D - 41 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0964 Lele-ChrLele25 6205974 6207454 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0964 25 6205974 6207454 Lele27g1114 27 18471897 18473361 hybridization
Lele25g0964 25 6205974 6207454 Lele28g0955 28 6238158 6239647 hybridization