Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0770 ATGGAACGTGCACGTCGGATCGCGAATAGGGGGATTCTGAGACGCCTCGTTTCACAAGCGAAACAGTACCGCCATAATGAATCTTCGCTGAACTCTTCCACACCTGTACTGTACACACCTTCTAGGTATGTATCATCTCTTTCTCCCTCTGCTTTTAGAGGCAGAGGATCCAAATCTGAGAACCTGCAGGGGGGGAATGCTCTGTCACGTAATGTTGCCTTTTGGGCTTCCCAATCTCGATCGATTTCAGTTGAGGCACTCAAACCCAGCGACACTTTTCCTCGTCGCCATAACTCTGCTACCCCTGAGGAACAGAGCAAAATGGCTCAGTCTTGTGGATTCGACAATCTTGACTCGCTCATTGATGCCACTGTGCCTAAATCGATCCGGTTGAATGATATGAAGTTTAACAAGTTTGACGAGGGGACGACGGAGAGCCAAATGATCGAGCACATGCAGTATCTGGCGGCCAAGAACAAGATTTTCAAGTCATACCTTGGGATGGGGTACTATAACACCTATGTGCCACCTGTGATTTTGAGGAACATAATGGAAAATCCAGCTTGGTATACCCAATATACTCCTTACCAGGCTGAGATATCCCAAGGACGTCTTGAATCCTTGCTTAATTTTCAGACCATGATCACTGATCTTACTGGTCTACCTATGTCCAACGCTTCATTGCTAGATGAAGGAACTGCCGCCGCCGAGGCAATGGCAATGTGCAACAATATTCTGAAGGGAAAGAAAAAGACTTTTATCATTGCCACCAACTGTCATCCTCAGACAATTGATATTTGCAAGACTAGAGCGGAAGGTTTTGATCTCAAGGTTGTTACAGCAGATGTCAAGGATATTGATTATAAATCGGGTGATGTTTGTGGTGTGCTCGTTCAGTACCCGGGCACCGAGGGTGAGATTTTGGATTATGGAGAGTTTATTAAGAAAGCTCATGCTCACGGAGTTAAGGTCGTAATGGCATCGGACCTTCTTGCTTTGACTGTGTTGAGGCCCCCCGGTGAATTGGGAGCAGATATTGTTGTCGGCTCAGCTCAGAGGTTTGGAGTTCCAATGGGTTATGGAGGTCCTCATGCGGCTTTCTTGGCCACATCCCAAGAGTACAAGAGGATGATGCCTGGAAGAATTATTGGTGTCAGTGTTGATTCTTCTGGAAAACCAGCCTTGCGTATGGCAATGCAAACCAGAGAGCAGCATATTCGTAGAGACAAGGCAACTAGCAATATATGTACTGCCCAGGCACTGCTTGCAAACATGGCTGCTATGTATGCTGTTTATCATGGACCTGAAGGACTTAAAACTATCGCCCAACGAGTTCATGGCCTCGCTGGGGTATTTGCTCTTGGATTAAAGAAACTTGGAACAGTTGAAGTTCAAGATCTTCCCTTCTTTGACACTGTGAAGGTTACAACTGCTAATGCCCATGCAATTGCTGATGCTGCTTACAAAAGTGAGATAAATTTGCGAGTTGTGGATAGAAACACTATCACTGCTTCCTTTGATGAAACAACCACTTTGGAGGATGTTGATAAGCTTTTCAAAGTTTTTTCTGGTGGCAAGCCTGTCTCCTTCACAGCTGCTTCTCTTGCTCCAGAGGTGCAGACTGCACTTCCTTCTGGACTAACTAGGGAGAGCCCTTATTTGACGCATCCTATCTTTAACACGTACCACACTGAGCATGAGTTGCTAAGGTATATTCATCGGCTACAGTCAAAGGATCTCTCGCTGTGCCACAGTATGATTCCACTTGGATCTTGTACAATGAAGCTGAATGCCACAAGTGAAATGATGCCTGTGACATGGCCTGGCTTTACTGACATTCACCCTTTTGCACCAGCTGAACAGGCTCAAGGTTATCAGGAAATGTTCAATAATTTGGGAGATCTATTGTGTGCCATCACGGGGTTTGACTCATTCTCTTTGCAACCTAATGCCGGTGCTGCTGGAGAATATGCTGGACTTATGGTTATTCGTGCATATCATAAAGCAAGGGGAGACCACCACCGTAATGTTTGCATCATACCTGTCTCAGCACATGGCACAAACCCAGCTAGTGCTGCTATGTGTGGAATGAAAATTGTCCCTGTTGGAACTGATGCCCATGGAAATATCAATATTCCAGAGTTGAAAAAGGCCGCTGAAACACACAAGGATAACTTATCCGCACTTATGGTTACATATCCTTCAACTCATGGTGTTTACGAGGAAGGTATTGATGAGATATGCCAGATAATTCATGATAATGGAGGTCAAGTGTATATGGATGGGGCAAACATGAATGCCCAGGTGGGACTCACAAGCCCTGGCTGGATTGGGGCAGATGTTTGCCATCTCAATCTTCACAAGACATTCTGCATCCCACATGGAGGAGGTGGTCCTGGCATGGGTCCTATTGGTGTAAAGAAACACTTGGCACCATTTTTACCTTCACATCCCGTGGTATCCACAGGTGGCATTCCTGCCCCTGACAAGACTCAGCCTCTTGGTACCATTTCTGCAGCACCTTGGGGCTCAGCACTCATATTACCAATTTCCTATACTTACATAGCCATGATGGGTTCGAAAGGACTTACTGAAGCATCCAAGATAGCCATTTTGAATGCTAACTACATGGCCAAACGATTAGAGAATCATTACCCTGTTCTTTTCCGAGGAGTCAATGGAACAGTTGCTCATGAATTCATTATTGACCTGAGAGGCTTTAAGAATACTGCTGGTATAGAACCTGAAGATGTGGCCAAGCGTCTTATGGACTATGGGTTCCATGGACCGACTATGTCGTGGCCCGTACCTGGTACTCTCATGATTGAACCCACTGAAAGTGAAAGCAAGGCTGAGTTAGACAGGTTTTGTGATGCTCTTCTTTCCATTCGAGAAGAAATCAGAGAGATAGAGAATGGGAAAGCTGATATTAATACTAATGTACTCAAGGGAGCCCCTCATCCTCCTTCCTTGCTAATGGGAGATGAATGGACCAAACCATACTCTCGGCAATATGCAGCATACCCAGCTCCCTGGCTCCGCGTTTCCAAGTTCTGGCCTACCACAGCACGTGTGGACAACGTATACGGTGACCGTAACCTCATCTGCACCCTCCTCTCGGTGTCGCAGACTGCTGAGGAACAAGCTGCTGCATCTGCTTAG 3162 0.4611 MERARRIANRGILRRLVSQAKQYRHNESSLNSSTPVLYTPSRYVSSLSPSAFRGRGSKSENLQGGNALSRNVAFWASQSRSISVEALKPSDTFPRRHNSATPEEQSKMAQSCGFDNLDSLIDATVPKSIRLNDMKFNKFDEGTTESQMIEHMQYLAAKNKIFKSYLGMGYYNTYVPPVILRNIMENPAWYTQYTPYQAEISQGRLESLLNFQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNNILKGKKKTFIIATNCHPQTIDICKTRAEGFDLKVVTADVKDIDYKSGDVCGVLVQYPGTEGEILDYGEFIKKAHAHGVKVVMASDLLALTVLRPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFALGLKKLGTVEVQDLPFFDTVKVTTANAHAIADAAYKSEINLRVVDRNTITASFDETTTLEDVDKLFKVFSGGKPVSFTAASLAPEVQTALPSGLTRESPYLTHPIFNTYHTEHELLRYIHRLQSKDLSLCHSMIPLGSCTMKLNATSEMMPVTWPGFTDIHPFAPAEQAQGYQEMFNNLGDLLCAITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPASAAMCGMKIVPVGTDAHGNINIPELKKAAETHKDNLSALMVTYPSTHGVYEEGIDEICQIIHDNGGQVYMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPDKTQPLGTISAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLENHYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALLSIREEIREIENGKADINTNVLKGAPHPPSLLMGDEWTKPYSRQYAAYPAPWLRVSKFWPTTARVDNVYGDRNLICTLLSVSQTAEEQAAASA 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0770 1053 TIGRFAM gcvP: glycine dehydrogenase 96 1037 IPR003437 GO:0004375|GO:0006544
Lele25g0770 1053 Pfam Glycine cleavage system P-protein 96 522 IPR020581 GO:0004375|GO:0006546
Lele25g0770 1053 Pfam Glycine cleavage system P-protein 543 815 IPR020581 GO:0004375|GO:0006546
Lele25g0770 1053 PANTHER GLYCINE DEHYDROGENASE, DECARBOXYLATING 77 1044 IPR020581 GO:0004375|GO:0006546
Lele25g0770 1053 SUPERFAMILY PLP-dependent transferases 96 521 IPR015424 -
Lele25g0770 1053 Gene3D Aspartate Aminotransferase, domain 1 857 991 IPR015422 GO:0003824
Lele25g0770 1053 SUPERFAMILY PLP-dependent transferases 560 1038 IPR015424 -
Lele25g0770 1053 MobiDBLite consensus disorder prediction 88 108 - -
Lele25g0770 1053 CDD GDC-P 565 960 IPR020581 GO:0004375|GO:0006546
Lele25g0770 1053 FunFam glycine dehydrogenase (Decarboxylating), mitochondrial 604 843 - -
Lele25g0770 1053 FunFam Glycine cleavage system P protein 429 518 - -
Lele25g0770 1053 FunFam Glycine dehydrogenase (decarboxylating), mitochondrial 176 436 - -
Lele25g0770 1053 FunFam Glycine dehydrogenase (decarboxylating), mitochondrial 853 991 - -
Lele25g0770 1053 Gene3D Aspartate Aminotransferase, domain 1 165 518 IPR015422 GO:0003824
Lele25g0770 1053 Hamap Glycine dehydrogenase (decarboxylating) [gcvP]. 87 1044 IPR003437 GO:0004375|GO:0006544
Lele25g0770 1053 CDD GDC-P 145 522 IPR020581 GO:0004375|GO:0006546
Lele25g0770 1053 Gene3D - 176 436 IPR015421 GO:0003824
Lele25g0770 1053 Gene3D - 604 856 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0770 Lele-ChrLele25 4878888 4883913 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0770 25 4878888 4883913 Lele27g1307 27 19798754 19803764 hybridization
Lele25g0770 25 4878888 4883913 Lele28g0764 28 4859335 4864246 hybridization