Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0563 ATGGATCATCATGGGATTGCGCAGCAGCCACTTGCAGAAGGATCGAAAGCAGAAGAAGGTGGAACTGCAAAGAGTACTCAAACTCATAATCTGATGATGGGTCAATCAAGAGGAGGCGAATCTCTGCCAACCTTCATTGGCAAGCATAGGTTGCAAGCTGCCATTTCCCACCTCAATAACGAAATCAATATAATTGAGGACGAGCTCGAGAAACTAGAAATAATGGGTGAATCGTCCAGTGTTTGCAAGGAATTGATTTCGAGCGTTGAATCGATTCCCGATCCACTGCTTCCATGGATTAAAGGTTCGGCGGATGGTGGTTGGGATCGGTGGTTCGGTGGCGTCCACCACTCGCGAAGTCATAAGCGCTGGATTTAG 378 0.4762 MDHHGIAQQPLAEGSKAEEGGTAKSTQTHNLMMGQSRGGESLPTFIGKHRLQAAISHLNNEINIIEDELEKLEIMGESSSVCKELISSVESIPDPLLPWIKGSADGGWDRWFGGVHHSRSHKRWI 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0563 125 Coils Coil 48 75 - -
Lele25g0563 125 MobiDBLite consensus disorder prediction 1 39 - -
Lele25g0563 125 MobiDBLite consensus disorder prediction 20 37 - -
Lele25g0563 125 PANTHER GUANINE NUCLEOTIDE-BINDING PROTEIN SUBUNIT GAMMA 1 31 125 IPR045878 -
Lele25g0563 125 Pfam GGL domain 58 112 IPR015898 GO:0007186
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0563 Lele-ChrLele25 3583003 3583649 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0563 25 3583003 3583649 Lele27g1514 27 21102257 21102903 hybridization
Lele25g0563 25 3583003 3583649 Lele28g0566 28 3609815 3610466 hybridization