Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0559 ATGATAGTTATGCTAGTGATAGAAACAGATGGAGGAGTTTCGCTGAAAGACGAAGAACATAAAGAGGTTGCTGAAGTGGCTCAAGAATTGCAAAAATATTGTGTGAATGAGCCAGTGAAATGCCCTTTAGTATTTGGAGAGTGGGATGTGGTGTACTGTTCAAGGCCAACATCACCGGGAGGTGGTTACAGAAGTGCTCTGGGTCGCCTTTTCTTTAAGACAAAGGAGATGACTCAGGTTGTTGAAGCTCCTGATATTGTAAGAAACAAGATCTGCTTTTCTCTTTTAGGCTTCCTGGACGGAGAGGTGTCTTTGAAAGGTAGGCGATTTGGGAAGCTAAAGGCTCTGGATGGTGAATGGATTCAAGTTGTATTTGAAGCACCTGAACTAAAGGTAGGGTCGTTGGACCTGCAGTATGGGGGTCAAAGCGAGGTTAAACTCCGAATCACTTACATAGATGACAAGATCAGATTAGGGAAAGGTTCCAGAGGTTCTCTCTTTGTTTTTAAAAGAATATGA 519 0.4277 MIVMLVIETDGGVSLKDEEHKEVAEVAQELQKYCVNEPVKCPLVFGEWDVVYCSRPTSPGGGYRSALGRLFFKTKEMTQVVEAPDIVRNKICFSLLGFLDGEVSLKGRRFGKLKALDGEWIQVVFEAPELKVGSLDLQYGGQSEVKLRITYIDDKIRLGKGSRGSLFVFKRI 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0559 172 Pfam PAP_fibrillin 142 170 IPR006843 -
Lele25g0559 172 PANTHER PLASTID-LIPID-ASSOCIATED PROTEIN 4, CHLOROPLASTIC-RELATED 5 171 IPR039633 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0559 Lele-ChrLele25 3555617 3556871 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0559 25 3555617 3556871 Lele27g1519 27 21131953 21134637 hybridization
Lele25g0559 25 3555617 3556871 Lele28g0561 28 3579738 3584770 hybridization