Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0430 ATGTGGTGCTCGGCCGCATTTCTCCATTTTGATATATTCTTTTGTTCAGTTCGTCTGCATCTCAATCCTCAGAGGCTGCGCTTCAGAAGCAGAGAAGGAGGATCAGAAACAGAGAGTCTGCGGTCAGATGAACATGAAAGGAGAAAATTGGATGCTGCCTTAGAAAATGTTCTAGATAAGGATTTAAAGCAGCTTTTAATGATAGTTGACATGACCAATAGTTTAGGAATTCAATCTGCTTCAACTTCATGTTTACTTAGAGGAGCTCTGTGCCCCTTAACGTTATCCCATGATCGTGTTTATCGTGCAAAAATGGCGACATTCGAACTGTACAGAAGGTCGACGATCGGAATGAGTCTCACCGATACTCTTGACGAGATGGTTCAGAACGGTTCTCTCAGCCCTGAGCTTGCTATTCAGGTTCTTGTCCAGTTCGATAAGTCTATGACTGAAGCTCTGGAAACGCAAGTCAAGAGTAAGGTCTCCATTAAGGGACATCTACATACATACAGATTCTGCGACAATGTTTGGACCTTCATTTTGCACGATGTTTTGTTCAAGAGTGACGAATGCCAAGAGAACATTGGAAGGGCAAAAATAGTGGCATGTGACTCAAAGTTGCTATCACAATAA 633 0.425 MWCSAAFLHFDIFFCSVRLHLNPQRLRFRSREGGSETESLRSDEHERRKLDAALENVLDKDLKQLLMIVDMTNSLGIQSASTSCLLRGALCPLTLSHDRVYRAKMATFELYRRSTIGMSLTDTLDEMVQNGSLSPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTYRFCDNVWTFILHDVLFKSDECQENIGRAKIVACDSKLLSQ 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0430 210 CDD TFIIA_gamma_C 161 206 IPR015871 GO:0005672|GO:0006367
Lele25g0430 210 Gene3D - 104 158 IPR009083 GO:0005672|GO:0006367
Lele25g0430 210 SUPERFAMILY Transcription factor IIA (TFIIA), alpha-helical domain 108 158 - -
Lele25g0430 210 Pfam Transcription initiation factor IIA, gamma subunit 164 205 IPR015871 GO:0005672|GO:0006367
Lele25g0430 210 PANTHER TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2 105 210 IPR003194 GO:0005672|GO:0006367
Lele25g0430 210 FunFam Transcription initiation factor IIA subunit 2 159 210 - -
Lele25g0430 210 FunFam Transcription initiation factor IIA subunit 2 106 158 - -
Lele25g0430 210 SUPERFAMILY Transcription factor IIA (TFIIA), beta-barrel domain 156 206 IPR009088 GO:0005672|GO:0006367
Lele25g0430 210 CDD TFIIA_gamma_N 108 155 IPR015872 GO:0005672|GO:0006367
Lele25g0430 210 Gene3D - 159 209 IPR009088 GO:0005672|GO:0006367
Lele25g0430 210 Pfam Transcription initiation factor IIA, gamma subunit, helical domain 108 153 IPR015872 GO:0005672|GO:0006367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0430 Lele-ChrLele25 2676570 2682126 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0430 25 2676570 2682126 Lele27g1653 27 22032785 22037566 hybridization