Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0335 ATGGACTCCATAATGAGCAAGCTCCGTAATCTGGATGCCTATCCTAAAATCAACGAGGATTTCTACAGCCGCACCCTCTCCGGTGGCCTCATCACCATCGCCTCCTCCGTCCTCATGCTCCTGCTTTTCATATCCGAGCTCCGATTGTATCTTCATGCAGTAACTGAGACCAAACTAGTTGTAGATACTTCAAGAGGAGAGACGCTACGAATCAATTTTGATGTGACATTTCCGGCCCTACCTTGTTCAATACTAAGTCTAGACGCCATGGACATCAGTGGAGAGCAACATCTAGATGTAAAACATGATATTGTCAAGAAAAGATTAGACTCTCATGGGAACGTTATAGAAACAAGGCAGGATGGGATTGGTGCCCCCAAGATTGAAAAGCCTTTGCAAAGACATGGAGGCAGGCTCGAGCATAATGAAACATATTGTGGTTCCTGTTATGGTGCCGAAGCGACAGATGAGGATTGTTGTAATTCCTGTGAGGAAGTTCGTGAAGCTTACAGAAAAAAAGGTTGGGCGATATCAAATCCAGATTTAATTGACCAGTGCAAAAGAGAAGGATTCTTGCAAAGGATCAAGGATGAAGAAGGTGAAGGTTGTAATGTCTATGGATTCTTGGAAGTAAATAAAGTGGCTGGAAATTTCCATTTTGCCCCAGGGAAGAGCTTTCAGCAATCTGGTGTCCATGTGCATGACCTGCTTGCTTTTCAAAAGGACTCATTTAATATAAGTCACCAAATTAACAGATTAGCGTTTGGAGAGTATTTCCCTGGTGTTGTGAATCCTCTTGATGGTGTGCATTGGACACAACAAACGCCAAGTGGGATGTATCAGTATTTTTTAAAGGTTGTGCCTACTGTATACACTGATGTGAACGGGCATACAATCCAATCAAACCAGTTCTCTGTGACAGAACACTTGAGGACTGGAGATGTGGGTCGTCTTCAGTCCCTGCCCGGAGTTTTCTTCTTCTATGACCTTTCCCCAATTAAGGTTACTTTTACTGAAGAGCATATCTCATTCTTACACTTCCTCACTAACGTGTGCGCCATAGTTGGAGGTGTTTTCACGGTTTCTGGAATACTGGATTCCTTTATCTACCATGGTCAAAAGGCAATCAAGAAGAAGATAGAAATTGGCAAATTTAGTTGA 1161 0.4289 MDSIMSKLRNLDAYPKINEDFYSRTLSGGLITIASSVLMLLLFISELRLYLHAVTETKLVVDTSRGETLRINFDVTFPALPCSILSLDAMDISGEQHLDVKHDIVKKRLDSHGNVIETRQDGIGAPKIEKPLQRHGGRLEHNETYCGSCYGAEATDEDCCNSCEEVREAYRKKGWAISNPDLIDQCKREGFLQRIKDEEGEGCNVYGFLEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQKDSFNISHQINRLAFGEYFPGVVNPLDGVHWTQQTPSGMYQYFLKVVPTVYTDVNGHTIQSNQFSVTEHLRTGDVGRLQSLPGVFFFYDLSPIKVTFTEEHISFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKAIKKKIEIGKFS 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0335 386 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 8 97 IPR039542 -
Lele25g0335 386 Pfam Endoplasmic reticulum vesicle transporter 149 366 IPR012936 -
Lele25g0335 386 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 5 385 IPR045888 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0335 Lele-ChrLele25 2033298 2038300 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0335 25 2033298 2038300 Lele27g1749 27 22710068 22715100 hybridization
Lele25g0335 25 2033298 2038300 Lele28g0351 28 2131985 2136929 hybridization