Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0278 ATGGCGAGTTCGGGATCGTTCTTGCCAGAGGTGAGTGCTAAGGAGGGTTGGAAATCGACGTCGAACAGATGGAGTGGGAAAATCAAGCATGGCAGAGGTAGTGGAGGGAAGAGCGTGGAGGCGAGCCTGAATCAAATGTGTGGAAACGACGGCAATAATACGGCGGCGAGAAAAAGAGTGATGGTGGTGGTTGATCACTCGTCGCATTCCAAGCATGCACTCATTTGGGCACTCACTAATGTTGCTAATAAGGCTGATTTGCTCACTCTGCTTCACGTCGTCCCTCCTCAAGCGCCTTCTCATTCCTCTTATTCCAACTATCTCCTCAACTATCTTCGCTCCCTCTGTAAAGACTGTAGACCTGAGGTGGAAGTGGATGCACTCGTAATTGAAGGACCAAAACTGAGCACAGTGATGAGCCAAGTGAAGAAGCTGGAGGTCTCGGTCTTAGTATTGGGCCAAAAGAAGCCATCTCTTCTGTTCAAATGTCTCTCTTTTTGGCAGCCTGTGTGGAAGAAGCAGCACAGAGGAGTTTGTGGAACATTGCATCCACGATATAGAGTGCTTGACAATAGGAGTGAGGAAGCGAAGCCAAGGCACGAATGGGTACCTCATCAGCACAAAGCGGCAGAAGAACTTCTGGCTTCTAGCTTAGAGATTTGTTGA 666 0.4895 MASSGSFLPEVSAKEGWKSTSNRWSGKIKHGRGSGGKSVEASLNQMCGNDGNNTAARKRVMVVVDHSSHSKHALIWALTNVANKADLLTLLHVVPPQAPSHSSYSNYLLNYLRSLCKDCRPEVEVDALVIEGPKLSTVMSQVKKLEVSVLVLGQKKPSLLFKCLSFWQPVWKKQHRGVCGTLHPRYRVLDNRSEEAKPRHEWVPHQHKAAEELLASSLEIC 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0278 221 MobiDBLite consensus disorder prediction 18 46 - -
Lele25g0278 221 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 58 161 - -
Lele25g0278 221 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 1 165 - -
Lele25g0278 221 Gene3D HUPs 57 165 IPR014729 -
Lele25g0278 221 CDD USP_Like 59 160 - -
Lele25g0278 221 Pfam Universal stress protein family 57 159 IPR006016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0278 Lele-ChrLele25 1660557 1661836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0278 60 204 Receptor kinase-like Gene Family AT5G35380 25.641 9.60e-06 44.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0278 25 1660557 1661836 Lele27g1810 27 23079008 23080339 hybridization