Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0206 ATGGAAATCGCACCGCCACTGCCGCGTGCTTTTCATCTGATCCAAGGTAGGCCCAGAGGAAAAGCTGTACCTTTGAACTTTGAGGTGGATGACGATACAAGCAACCATTCCCCAGATCGTGCAAATGAAAACAATGGCCCTCTTCTTGGCTATCATGGATTTCCACTACCCCGAGCCAGCCGCACTGACTCAACGCGTTACCCTAGAGCCACCCCTTCTGACTCAGGTCCACCGCCTCCGACCCGATGGGCTGCGAGCCCCAGAAGAATGGGTGGACTAATGCAGCGCCTAGAATCTCGAGATCGAGCTTGTTCTCGGGATTTCCCGCTGCCATCGCCAGATTATGAACTATGTTTGCACCGGCGCTTCGACGGAAACGGCGAGGATGTTGGCCTTGGGGACGAGAGCGGAAACGTAGTTGTGGAAAAGGGAATTAAAAGGGGAGGAGACGAGGAAGCCGCCCACATGGAAGTAGAGCAAGAGGGGGAGCTTGCGTTCGCGGCGAGTGAGCTGGGGGAGGAAGAGACGGGCAGAGATGCTGGAGTGAGGGAGGAGGGTGACGTCCTTGGAGGAAACGACAGCGTTTGGGGAGGAGGGAACAAAATCGGTACTTGTGAGCCTCTCAACAAGGTCGGGAAGAAGAGAGGTGGAATCCATGAAGGGAGAAAGAAGGTGCGTGGGGAGAGATCAGATAAGAGTGCAAGAGCAAGACTTGGAGGCTGCAATCGAAAACGAGAGGAAAAGAATAACATAAGTGTGATTTCAGACATCTTCATGTTCAAGTCAATTCTTCTCGTGGAAGGAAAGATGGGTAAAGGGGCGGCTCTTAGATCACTTTTCCGATCACTATCTTCCAGATCTCATCGTTTCTCTGCCAACAATAACCATATCCTTCGCACCAGCCATACTCGTCACCACGAGCGTTTGGCCGTTCGTACCCTTTTTAACCTCTCACCCTCTCATGTCTCTTCTTCTGCCGATCGTTGCCCTACAGAATGCTGGTCTTCTATCTCAACAGGCTTGGGAAGTGTGCGATTTTATAGCGAACATGTAATCCACTTGCCTGAAATTAAAGACCCTAGGCTACAAAATGCTTTCAAGGATTTGATGGCAGTAAATTGGGATGAGCTCCCCCATGCTGTCATTTATGATGTGAAGGCAGCACTTACAGGAAATACTGATGACAAAGCTGGCAAGGAAATAGTGGAAAATGTTTTCCGTGCTGCGGAAGCCATTGAAGAGTTTAGTGGGATACTAGTGACCTTAAAAATGGAAATTGACGACAGCATTGGGTTAAGTGGCGAGGATGCAAGGCCCGCACCTGATCATATAAAGAATGCACTTCAAACTGTTTTTTATCGTTACACCACTTATTTGAGTTCGTTTGGGCCGGATGAAAGCTACCTGCGGAAGAAGGTGGAGACAGAACTGGGCACAAAGTTGATACACTTGAAAATGAGGTGCAGTGGCCTTGGTTCTGAGTGGGGAAAGGTTTCTGTTCTTGGAACTTCTGGACTTGCGGGTTCTTATGTTGAACAAAGAGCATAG 1548 0.4955 MEIAPPLPRAFHLIQGRPRGKAVPLNFEVDDDTSNHSPDRANENNGPLLGYHGFPLPRASRTDSTRYPRATPSDSGPPPPTRWAASPRRMGGLMQRLESRDRACSRDFPLPSPDYELCLHRRFDGNGEDVGLGDESGNVVVEKGIKRGGDEEAAHMEVEQEGELAFAASELGEEETGRDAGVREEGDVLGGNDSVWGGGNKIGTCEPLNKVGKKRGGIHEGRKKVRGERSDKSARARLGGCNRKREEKNNISVISDIFMFKSILLVEGKMGKGAALRSLFRSLSSRSHRFSANNNHILRTSHTRHHERLAVRTLFNLSPSHVSSSADRCPTECWSSISTGLGSVRFYSEHVIHLPEIKDPRLQNAFKDLMAVNWDELPHAVIYDVKAALTGNTDDKAGKEIVENVFRAAEAIEEFSGILVTLKMEIDDSIGLSGEDARPAPDHIKNALQTVFYRYTTYLSSFGPDESYLRKKVETELGTKLIHLKMRCSGLGSEWGKVSVLGTSGLAGSYVEQRA 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0206 515 Pfam Succinate dehydrogenase subunit 5, mitochondrial 274 515 IPR025397 GO:0006099|GO:0045273
Lele25g0206 515 MobiDBLite consensus disorder prediction 30 88 - -
Lele25g0206 515 PANTHER SUCCINATE DEHYDROGENASE SUBUNIT 5, MITOCHONDRIAL 275 515 IPR025397 GO:0006099|GO:0045273
Lele25g0206 515 MobiDBLite consensus disorder prediction 221 240 - -
Lele25g0206 515 MobiDBLite consensus disorder prediction 213 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0206 Lele-ChrLele25 1229015 1235391 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0206 25 1229015 1235391 Lele27g1880 27 23506838 23508904 hybridization
Lele25g0206 25 1229015 1235391 Lele28g0226 28 1315721 1317889 hybridization