LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele24g1911	ATGGAAGGCAGTGAAAGTGAGGCCATTTTCGACTCCCTTAATCTCAATCCGCAACTCTTTGTCAACGAAGTCCTCAACACGGTCGACGATGTTGTAAATGATGCTCTCGATTTCTTCTACCAAGAAGCGTCGGCGAAGCTCAACTCCGAAGGCGCCGAAAGATCCCAAGATCTGAGAAAGGGTGTTGATTGCATCCGCAACGTGATTCAAGCAGTTTTGGACAAGAGGCTGGCTATTTGGGAGAAATATTGCCTTCGTCACTGTTTTTCTGTTCCCCAAAGTTTTGTTATGCAAAAGAGTGTAGGTTCTCTTTCTTTATGGTGGAATAGGAGTAGCATAATAGAGGAAATCCATTTACGGTCCTTAGGTCGCAGACTAGAAATGAATGAAAAGAGTGGAATTGAAAACGTGATTTCGTAATCTCTTTCTGATCCAGAGATAGAGGCGCAATTAGATTCCATGAGAAAGAAACTAACTGAGGTTGGTAAGGCGTCTGAAATGTTAAATCAAGAAGTTCGAGCATTAGAAAGGCGGTCTACTTCTTACAGTGGGTTAATCAATGAGACATTACTATTACATGATCAAAACTCTTTCCATGAGTTATTTCAGGGTAACTACAGAGCTTCTTTGGTCAACAATTTAGATGTTCTAAAATACCCTCTCATTTTGAAGGAGCTTAATTTGAGTGAGCGGCACAATCTGCAGAGTAAGACCGGCGGCATTGACTCTGATTGCAAGAGGCCAAAAGGTGGTGGTGGAGGGAGGTCCGAGAGGAATGTTGACCGCAATCCAGAAGTCGCCTCTGGAAGTCCTCTTGATGTTATCGGGTCTGCCGACCCCGCCAAGCAGCAGGAAAACTTCCGATGTATTTTGTCTGGGGCCTGTGAGCCAGAATCTCCGAACTCGACTGCCCAAGAACTCAGTCACCAGCAAGTGAGCCATCTCCGCTCACCGCCACCCCACCCCACCTGCCAGAGCAAGGTCCCCCTGCAACACGCTGGTTTGTCCCGTTCTTGGATCATAACTAAGCAGCCTTCCCGAACTGTCCCCGCTGGTGACAGTGCCTGCATGTCCCTTGAAATAAATAATGCCAGTGGAAGGTTCAATGTCGAGAGCATCGAGGAAGCGGAAAGGACGACACTGCACAGATGCGACGACTACGGTTGGGCGGCCTCCGGAGGAAGGCACCTTGACGAGGCCCTGCTATGCATCCGCTATGTACCATTCCTGCGTCCTGTTATGAAACCCCAATCCCAATGGCCTCCCACATGTTTCTTGCTCTTCTGA	1287	0.4794	MEGSESEAIFDSLNLNPQLFVNEVLNTVDDVVNDALDFFYQEASAKLNSEGAERSQDLRKGVDCIRNVIQAVLDKRLAIWEKYCLRHCFSVPQSFVMQKSVGSLSLWWNRSSIIEEIHLRSLGRRLEMNEKSGIENVISXSLSDPEIEAQLDSMRKKLTEVGKASEMLNQEVRALERRSTSYSGLINETLLLHDQNSFHELFQGNYRASLVNNLDVLKYPLILKELNLSERHNLQSKTGGIDSDCKRPKGGGGGRSERNVDRNPEVASGSPLDVIGSADPAKQQENFRCILSGACEPESPNSTAQELSHQQVSHLRSPPPHPTCQSKVPLQHAGLSRSWIITKQPSRTVPAGDSACMSLEINNASGRFNVESIEEAERTTLHRCDDYGWAASGGRHLDEALLCIRYVPFLRPVMKPQSQWPPTCFLLF	428

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele24g1911	428	PANTHER	PROTEIN MIS12 HOMOLOG	3	204	IPR008685	GO:0000278\|GO:0000775\|GO:0005634
	Lele24g1911	428	Pfam	Mis12 protein	10	169	IPR008685	GO:0000278\|GO:0000775\|GO:0005634
	Lele24g1911	428	MobiDBLite	consensus disorder prediction	299	328	-	-
	Lele24g1911	428	MobiDBLite	consensus disorder prediction	234	277	-	-
	Lele24g1911	428	Coils	Coil	158	178	-	-
	Lele24g1911	428	MobiDBLite	consensus disorder prediction	242	262	-	-
	Lele24g1911	428	MobiDBLite	consensus disorder prediction	299	320	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele24g1911	Lele-ChrLele24	23803140	23807294	Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lele24g1911	24	23803140	23807294	Lele24g1911	24	23803140	23807294	ECH
	Lele21g1992	21	26852666	26855267	Lele24g1911	24	23803140	23807294	hybridization
	Lele22g1959	22	24227548	24229664	Lele24g1911	24	23803140	23807294	hybridization