Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1627 ATGGTGGATCAGATCCACACTCCACCGCCTAGATCCGCCGCGGACCTCTTCTCCGATCCTCTCGATACTCACCCTTTGTGGTTCAAGCCTGCATCATTTCTATCCCCGGATTTCGATTCTGAATCCTACATTTCGGAGCTCCGTACTTTCGTCCCATTCGACACTCTTCGGTCTGAGCTCCAGAATTACTTATCCTCCCTCAATCACGAACTCATCGATCTAATTAATCGTGACTATGCCGATTTCGTAAACTTGAGCACTAAGCTCGTCGATGTAGACGCCGCAGTGGTGCGCATGCGAGCCCCGCTGGTAGAGCTTAGAGATAAAATTGAGCAATTCAGGGGATCAGTGGAAGGTTCGCTCGTGTCCATGAAGAACGGGCTAAGGCAAAGATCCGGGGCAGCCTCAGCGAGGGAGACTTTGGAGCTTCTTCTGGATACATTTCACGTGGTATCTAAGGTTGAAAAACTAATAAAGGAGCTACCTAGTGTGCCTACTGATTGGTCAAATGGAGATGTAAATTCCTCCGAGAGAAACTCCATGAGTAATGAGATTTCTGTGCAACATGTTGAGAATGGGACCAGTGTCAGAGAAACTCAAAGCATGCTGCTAGAGAGAATCGCTAGTGAGATGAACCGGCTGAACTTCTATGTCACACATGCGAAGAACCTGCCTTTTATTGAAAATATGGAGAAGAGGATTCAAAATGCTAGCCTAATATTGGATGCAAGCTTGGGCCATTGCTTTGTAGATGGTCTAGAACACCGAGACGCAACTGCAATATACAATTGTTTACGAGCATATGCTGCCATTGATAACACCAAGAATGCAGAAGAAATTTTTCAAACCACTATCGTAGCTCCATTGATACAGAAGATTATTCCACATGGACCTTCAGCCATGGCTGCTGAGTCATCTGCAGATAGACTTGATAGTGATTATGAGCAGATTAAGGAGTGCATTGATAAAGACTGTAAATTTTTATTGAAGATTTCTTCAGCTGAAAATTCTGGGTTGCATGTTTTTGACTTCTTGGCCAATTCAATTCTCAAAGGGATTCTCTCTGCAATCCAGAAGGGAAAGCCTGGTGCATTTTCTCCTGGAAAACCTACAGAGTTCTTGAAAAATTACAAATCAAGCTTAGATTTCTTAGCTCATCTCGAAGGCTACTGCCCGTCCAGATCTGCTGTTGCTAAATTTCGTTCTCAAGCCATTTATTCAGAGTTCATGAAGCAATGGAATGTTGGTGTATATTTCTCTTTGAGGTTTCAGGAAATAGCAGGAGCTCTAGATTCTGTGCTTACAACGACCAGTCTTGTCCCTGTTCAAAACTCAGACCCTGGAGAAGCAAATTATCAAAATTTAACACTAAAACAAAGTGTCACTCTATTGGAGAGTTTGAAGTCATGCTGGAGAGAAGATGTCTTTTTGCTTTCTTGTTCTGACAAGTTCCTCCGCTTAACCTTGCAGCTTCTTGCTAGATATACTAATTGGTTGTCAACTGGGCTGACTGCTCGTAAGACTGGGAACACAAGCACCATCCCAGGGTCCGAATGGGCTGTTTCAGCTGTTGCAGATGACTTTATTTTTATTATTCATGATATCAGATGTCTGGTGGAGCAGGTTGATGGTGATTTTCTTCAACATGTGCTTCAAATTCTATCTTCTTGTTCCTCCGATGTTCTTGAGTTGGTAAGGCAGAGTATTTTACAAGGTGGTCAATCATTGAAAGATTTGGAACCTTTAGTCATCAAAACAGTATTGGAGTCACTTGTGGAGAAGTCAGTCGAGGACCTGAGACAGATGAAGGGAATAACGGCAACCTACAGGATGACTAATAAACCGCTTCCTGTGAGGCATTCCCCCTATGTTTCCGGGGTATTGCGCCCTCTTAAGACTTTTCTGGATGGGGAGAGGGCTGCAACATATTTGGCAAGTGAAGCCAGAACTAAAGTACTTATAGGTGCTGCAACTGAAATCACTGACCGTTATTACGAATTAGCAGCTGATCTTGTTAATGTGGCAAGAAAGACAGAGTCTTCACTCCAGAGGATTCGGCAGGGAGCACAACAAAGGCGGGGTGGAGCTAGTTCGGACGTCTCAGATCATAATGTGTCTGACACGGACAAAATCTGTATGCAGTTGTTCCTTGACATTCAGGAGTATGCTCGCAACTTGTCTTCGTTAGGGGTTGATGCAGTCAGTATACCATCCTATCGTTCATTGTGGCAGTGTGTGGCTCCTGCAGATAGGCAAAACACAATCAAGTTTTAA 2274 0.4389 MVDQIHTPPPRSAADLFSDPLDTHPLWFKPASFLSPDFDSESYISELRTFVPFDTLRSELQNYLSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAPLVELRDKIEQFRGSVEGSLVSMKNGLRQRSGAASARETLELLLDTFHVVSKVEKLIKELPSVPTDWSNGDVNSSERNSMSNEISVQHVENGTSVRETQSMLLERIASEMNRLNFYVTHAKNLPFIENMEKRIQNASLILDASLGHCFVDGLEHRDATAIYNCLRAYAAIDNTKNAEEIFQTTIVAPLIQKIIPHGPSAMAAESSADRLDSDYEQIKECIDKDCKFLLKISSAENSGLHVFDFLANSILKGILSAIQKGKPGAFSPGKPTEFLKNYKSSLDFLAHLEGYCPSRSAVAKFRSQAIYSEFMKQWNVGVYFSLRFQEIAGALDSVLTTTSLVPVQNSDPGEANYQNLTLKQSVTLLESLKSCWREDVFLLSCSDKFLRLTLQLLARYTNWLSTGLTARKTGNTSTIPGSEWAVSAVADDFIFIIHDIRCLVEQVDGDFLQHVLQILSSCSSDVLELVRQSILQGGQSLKDLEPLVIKTVLESLVEKSVEDLRQMKGITATYRMTNKPLPVRHSPYVSGVLRPLKTFLDGERAATYLASEARTKVLIGAATEITDRYYELAADLVNVARKTESSLQRIRQGAQQRRGGASSDVSDHNVSDTDKICMQLFLDIQEYARNLSSLGVDAVSIPSYRSLWQCVAPADRQNTIKF 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1627 757 MobiDBLite consensus disorder prediction 683 702 - -
Lele24g1627 757 Pfam COG (conserved oligomeric Golgi) complex component, COG2 26 157 IPR024602 -
Lele24g1627 757 PANTHER CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2 9 754 IPR009316 GO:0007030|GO:0015031|GO:0016020
Lele24g1627 757 MobiDBLite consensus disorder prediction 683 703 - -
Lele24g1627 757 Pfam COG complex component, COG2, C-terminal 590 719 IPR024603 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1627 Lele-ChrLele24 21869340 21874888 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g1627 24 21869340 21874888 Lele24g1627 24 21869340 21874888 ECH
Lele21g1685 21 24810889 24816764 Lele24g1627 24 21869340 21874888 hybridization
Lele22g1664 22 22169152 22174676 Lele24g1627 24 21869340 21874888 hybridization