Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1620 ATGGCGGCTGTGGTTCGCTGCAGGTTCAAGCTGATGAACATGATTTTGCTGATCCTGTGTTTCGCCTGCTTGAACGTCGACGTTTTGGCTCACGTTAATCATCATGTGATCGGAGAGCAGCCACTATCTAAGATTTCCATTCAAAAAGCCACTTTTGCGCTCGACATTAGGGCCACCATTAAAGCAAACCCTTCTTTGCTTGGCCTCAAGGGTGAGGATACACAATGGGTGACTGTAGAACTTAATGCCCCTAATCCATCTGCAGATGACTGGGTGGCGGTATTTTCTCCTGCAAACTTCAATTCAGCTACCTGCCCACCGGAGAACGGAGAGTGGATCGAAGCACCATTCATTTGCACAGCTCCAATAAAGTACAAGTATGCGAATGACTCCAACCCAGACTATACAACAACAGGGAAAGCTGTTTTGAAGTTCCGGTTGATCAATCAACGTGCAGATTTCTCCTTTGCATTATTTTCTGGTGGACTTTCAAATCCTAAACTCGTGTCAGTTTCCAATTACATAGCATTTTCCAATCCTAAAGCGCCTGTATATCCACGCCTTGCTCAAGGGAGATCTTGGGATGAAATGACGGTTACCTGGACAAGTGGATATGACATAGATGAAGCCATACCATTTGTTCAGTGGGGACCTGAAGGAGGAAAGAAAACGCGATCTCCTGCTGGAACATTGACTTTCTCTCGCAACAGCATGTGTGGTCCACCTGCACGGACCGTGGGCTGGCGTGACCCTGGTTTTATTCACACAAGTTTCCTCAAAGATCTGTGGCCAAATTTTGTGTACACTTACAGAGTGGGGCATTTGCTTTCTAATGGATCTTATATCTGGGGCAAGCTTTACTCGTTCAGGGCATCACCATTTCCTGGACAGAACTCATTGCAGCGTGTCATCATATTTGGTGACATGGGGAAGGCTGAGCGTGATGGTTCAAACGAATACGCTAATTACCAACCTGGTTCGCTGAACACTACTGACCAGCTCATCAAGGATATGGATAATTATGATATTGTTTTCCACATTGGAGATTTGCCATATGCAAATGGATACATCTCACAGTGGGACCAATTCACAGCTCAAGTGGCACCAATTTCATCTGTGGTGCCATATATGATCGCAAGTGGAAATCATGAACGTGATTGGCCAAACACAGGATCCTTCTATGATACCGACGATTCAGGAGGAGAATGTGGAGTGCCGGCAGAAACCCTGTATTATGTGCCTGCTGAGAACAGAGCTAAATTTTGGTATAAAATAGATTATGGTATGTTTAGGTTCTGCATAGCTGATAGTGAGCATGACTGGAGACAAGGATCAGAGCAGTACAAATTTATTGAGCATTGCCTTGCAACAGTAGATAGAAGAAAGCAGCCATGGTTGATCTTTTCTGCTCATCGTGTGCTTGGGTATTCCTCTAATAGTTGGTATGGCTTGGAAGGCTCATTCCAAGAGCCCATGGGAAGGGAAAGCTTGCAGGGTCTCTGGCAAAAGTACAAAGTAGACATTGCATTTTATGGCCACGTCCATAACTATGAAAGATCCTGCCCCATCTATCAGAATCAATGTGTGAATTCAGAGAAGTCCCATTATTCTGGTACGGTGAATGGAACAATTCATATTGTTGTTGGAGGAGGAGGAAGCCACCTGTCAGATTTCAGCAAAATAAACCCTGTTTGGAGCATTTACAGAGACCATGACTTTGGGTATGGCAAATTGACAGCATTCAATCACTCATATCTTAAGTGGGAGTACATGAAAAGTAGTGATGGGAAGGTATATGACTCTTTCACAATATCAAGGGACTACAGAGATGTGTTGGCCTGTGTGCATGATGGTTGTGAGAGAACCACCTTAGCTACCTGA 1881 0.446 MAAVVRCRFKLMNMILLILCFACLNVDVLAHVNHHVIGEQPLSKISIQKATFALDIRATIKANPSLLGLKGEDTQWVTVELNAPNPSADDWVAVFSPANFNSATCPPENGEWIEAPFICTAPIKYKYANDSNPDYTTTGKAVLKFRLINQRADFSFALFSGGLSNPKLVSVSNYIAFSNPKAPVYPRLAQGRSWDEMTVTWTSGYDIDEAIPFVQWGPEGGKKTRSPAGTLTFSRNSMCGPPARTVGWRDPGFIHTSFLKDLWPNFVYTYRVGHLLSNGSYIWGKLYSFRASPFPGQNSLQRVIIFGDMGKAERDGSNEYANYQPGSLNTTDQLIKDMDNYDIVFHIGDLPYANGYISQWDQFTAQVAPISSVVPYMIASGNHERDWPNTGSFYDTDDSGGECGVPAETLYYVPAENRAKFWYKIDYGMFRFCIADSEHDWRQGSEQYKFIEHCLATVDRRKQPWLIFSAHRVLGYSSNSWYGLEGSFQEPMGRESLQGLWQKYKVDIAFYGHVHNYERSCPIYQNQCVNSEKSHYSGTVNGTIHIVVGGGGSHLSDFSKINPVWSIYRDHDFGYGKLTAFNHSYLKWEYMKSSDGKVYDSFTISRDYRDVLACVHDGCERTTLAT 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1620 626 Pfam Calcineurin-like phosphoesterase 302 517 IPR004843 GO:0016787
Lele24g1620 626 Pfam Fn3-like domain from Purple Acid Phosphatase 60 179 IPR040974 -
Lele24g1620 626 CDD MPP_PAPs 301 606 IPR041792 -
Lele24g1620 626 Pfam Iron/zinc purple acid phosphatase-like protein C 542 601 IPR025733 -
Lele24g1620 626 PANTHER PURPLE ACID PHOSPHATASE-RELATED 18 610 - -
Lele24g1620 626 Pfam Purple acid Phosphatase, N-terminal domain 188 290 IPR015914 GO:0003993|GO:0046872
Lele24g1620 626 SUPERFAMILY Purple acid phosphatase, N-terminal domain 160 293 IPR008963 GO:0003993|GO:0046872
Lele24g1620 626 Gene3D - 296 610 IPR029052 -
Lele24g1620 626 Gene3D - 182 294 - -
Lele24g1620 626 SUPERFAMILY Metallo-dependent phosphatases 298 608 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1620 Lele-ChrLele24 21823391 21827916 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1620 55 604 Miscellaneous Gene Families AT1G13900 29.091 1.56e-58 206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0334 23 2335995 2340254 Lele24g1620 24 21823391 21827916 ECH
Lele24g1620 24 21823391 21827916 Lele24g1620 24 21823391 21827916 ECH
Lele21g1678 21 24753230 24753991 Lele24g1620 24 21823391 21827916 hybridization
Lele22g1656 22 22098680 22103209 Lele24g1620 24 21823391 21827916 hybridization