Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1229 ATGTTACAGATTGAGGAATATGGTGGACAAGCTCTTCCATTTGGGGGAGATGTTTCTAATGAGGCAGATGTGGAGGCTATGATTAAAACTGCAGTTGATGCTTGGGGAACTGTTGATGTGTTGGTAAACAATGCAGGAATCACTAAGGATGGTTTGTTAATGAGAATGAAGAAATCTCAATGGCAGGATGTTATTGATCTCAATCTCACTGGTGTTTTTCTTTGCACCCAAGGAAGGATAATCAACATTGCATCAGTTGTTGGTCTAGTTGGCAATGTTGGACAAGCCAATTATAGTGCTGCAAAGGCAGGAGTAATTGGCCTGACGAAAACTGTTGCAAGGGAATATGCAAGCAGAAACATCAATGTAAATGCTGTTGCTCCAGGGTTTATTGCATCGGACATGACTGCCAAACTTGGAGAGGACATCGAGAAAAAAATTTTGGAGTCAATTCCCTTAGGAAGATATGGACAGCCAGAAGAAGTAGCAGGATTGGTGGAATTCTTGGCTCTTAATCCTGCTGCCAGTTACATCACTGGACAGGTGTTAACTATTGATGGAGGAATGGTGATGTAA 576 0.4184 MLQIEEYGGQALPFGGDVSNEADVEAMIKTAVDAWGTVDVLVNNAGITKDGLLMRMKKSQWQDVIDLNLTGVFLCTQGRIINIASVVGLVGNVGQANYSAAKAGVIGLTKTVAREYASRNINVNAVAPGFIASDMTAKLGEDIEKKILESIPLGRYGQPEEVAGLVEFLALNPAASYITGQVLTIDGGMVM 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1229 191 Pfam Enoyl-(Acyl carrier protein) reductase 6 189 - -
Lele24g1229 191 Gene3D - 2 191 - -
Lele24g1229 191 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 85 113 IPR020904 GO:0016491
Lele24g1229 191 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 191 IPR036291 -
Lele24g1229 191 PRINTS Glucose/ribitol dehydrogenase family signature 72 88 IPR002347 -
Lele24g1229 191 PRINTS Glucose/ribitol dehydrogenase family signature 98 117 IPR002347 -
Lele24g1229 191 PRINTS Glucose/ribitol dehydrogenase family signature 36 47 IPR002347 -
Lele24g1229 191 PRINTS Glucose/ribitol dehydrogenase family signature 119 136 IPR002347 -
Lele24g1229 191 PRINTS Glucose/ribitol dehydrogenase family signature 152 172 IPR002347 -
Lele24g1229 191 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE 3 190 - -
Lele24g1229 191 FunFam 3-oxoacyl-[acyl-carrier protein] reductase 1 191 - -
Lele24g1229 191 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 36 47 IPR002347 -
Lele24g1229 191 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 98 117 IPR002347 -
Lele24g1229 191 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 86 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1229 Lele-ChrLele24 16272696 16275243 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1229 3 191 Acyl Lipid Metabolism Gene Families AT1G24360 73.500 6.40e-105 302
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1306 21 21224325 21227932 Lele24g1229 24 16272696 16275243 hybridization
Lele22g1305 22 18536784 18540522 Lele24g1229 24 16272696 16275243 hybridization