Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0624 ATGGAAGCTGCAGATGAGGGAATAGAGAGGATAGAGGATTCCAAGGACTTACAGCAACAGAGCAAAGCGTTTGATAAGCTCACTGACCGCGTCGAGGATCGCCAGCTCGACTCCACTCGCGTCCAAGAGGCCATGGCGTCAATTGCTGCATCTGCAGAAGCGGACTGGAATGCGATGCGTTTGAGGGAGAAAGAACTGGCTGCTGTTAAGATAAATGCAGCTGATGTTGACATAATCGCAAATGAACTAGAGCTGGACAAAAAGGTGGCTGAAAGAACCTTGCGTGAGCATAAAGGTGATGCCGTTGCTGCCATTAGGCATTTGCTTCGCTAA 333 0.4955 MEAADEGIERIEDSKDLQQQSKAFDKLTDRVEDRQLDSTRVQEAMASIAASAEADWNAMRLREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRHLLR 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0624 110 PANTHER HUNTINGTIN-INTERACTING PROTEIN K FAMILY MEMBER 5 110 - -
Lele24g0624 110 Gene3D - 70 108 - -
Lele24g0624 110 Coils Coil 80 100 - -
Lele24g0624 110 CDD UBA_HYPK 69 109 IPR038922 -
Lele24g0624 110 Pfam HYPK UBA domain 69 109 IPR044034 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0624 Lele-ChrLele24 4159835 4162374 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g0624 24 4159835 4162374 Lele24g0624 24 4159835 4162374 ECH
Lele21g0628 21 4185367 4185935 Lele24g0624 24 4159835 4162374 hybridization
Lele22g0622 22 4116490 4119034 Lele24g0624 24 4159835 4162374 hybridization