Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0109 ATGGAGGAGAGTGCGCAGTTGCCCATTGAGATGAGAGCATTGGAGTGTCTTGGTAAAGGGTTTGATCTGACCAGTGATTTCCGATTGAAATTTGCCAAGGGAATCGAAGGCGGGAGGTTGGTCGAGCTCGACGAAGTGAACAAGAGGGACATTTTGATTCCTGGGGGAACTACCATTAAAGGAGTGTCAGAGGATATCAGGTGTGATAAAGGGGATCGAATTCGCTTCAAATCCGATGTACTGGAATTCAACCAGATGTCAGAGTTGCTTAATCAAAAGTCAGCAATACAAGGAAAAATTCCTTCGGGCTATTTTAATGCTCTCTTTGATTTAAGTGGCGATTGGTTTCGCGATGCTGCTGACACCAAATATCTTGCTTTTGATGGTTATTTCATTTCACTGTACTATTTGCACTTAATAGCTTCTCCACTTGTTCTGCGAGAGGAAGTAAAGAGGTCTGTTCCATCTCAATGGGATCCAGCTTCATTGTCTAGGTTCATCCGGACATACGGCACTCACATAATAGTAGGCATGGCTGTTGGAGGGCAAGATGTAATCTTTGTTAAACAAAAACACTCTTCAAAGCTTCCTCCTGGTGATCTCAGAAGATGTTTAGAGGATCTAGGAGATTATATGTTTTCAGATAGAAGAAGCCCTTCTCTACTGCAGATGAAGATAGCAGATGGAAAACATAAAGTTCCTGAAGTCTTCAATCGTGTGATGCAATCAAGCACAATGAATTTCACCAGTATTTCTGAAACATCAAGCAAAGATGGCCTCACTATCATCTGCTCAAAAAGAGGAGGAGATATTCTCAAGACCAGTCACTCAAATTGGCTCCAGACAGTGCCTTCTAATCCTGAAGCAATTCTCTTCAAGTTTGTTCCTATATCCTCACTTCTGGCAGGGATTCCTGGAAGCGGTTATCTTAGTCATGCAATCAATTTGTATTTGCGATATAAGCCTGCTCCTGACGATTTACAATACTTCTTAGAATTTCAAATTCCCAGGCAATGGGCTCCCATGTTTTGTGAGCTGCCTCTCAGGCATCAATGGAGAAATAGCTCTTCTCCTTCCCTTCAATTCAGTTTCATGGGCCCTAAACTTCATGTCAGCCCTGGGCAGGTATTAAGTGAAGAAAAACCTGTAGTTGGCCTCCGCTTGTACTTAGAGGGTAGAAAATGTGACAGGCTGGCAATACATGTACAGCATCTTTCTAGCCTCCCCAACACTATGGTCCTCTCCTCAAGTAACCAAACAATGAGCAGGCCATCTATGTGGCGAGGTTCTGATGAACACGAATCTAGTTACCAATTCCTGGAGCGAGTCAGATGGAAGAGATTCTCAAATGTGTGCACATCTGTAGTAAAGCATGACCCTAACTGGTTGCATGGTTCTAGTGGGGTTTATATTGTAACTGGTGCTCAACTCTTTGGCAAAGGGAGTTGGCCAAGAAATGTGCTTCATCTGCGACTTCTCTTCACTCATATTCCTAACTGCAGCATCCGAAAGACTGAGTGGACTACCGCACCAGAGGCTTCAAGGAAGTCATCTTTCCTAACAAATATCAGCACGACATTCACATTCACACAACAGAATAATACAGGTCCCCGGAAGCAGGCTCCGAATGTATTGAATTCTGGTGTTTATCCAGAAGGTCCGCCTGTGCCAGTTCGCTCCGGTAAACTGCTTAAATTTGTAGAGACATCTGAGGTTGTGAGAGGCCCACATGATGCTCCTGGACATTGGCTGGTAACAGCCGCCAAGCTAGTGGTTGAGGGTGGTAAAATTGGATTGCTTGTAAAGTTTGCTTTGTTAGACTATTGGTGA 1830 0.4388 MEESAQLPIEMRALECLGKGFDLTSDFRLKFAKGIEGGRLVELDEVNKRDILIPGGTTIKGVSEDIRCDKGDRIRFKSDVLEFNQMSELLNQKSAIQGKIPSGYFNALFDLSGDWFRDAADTKYLAFDGYFISLYYLHLIASPLVLREEVKRSVPSQWDPASLSRFIRTYGTHIIVGMAVGGQDVIFVKQKHSSKLPPGDLRRCLEDLGDYMFSDRRSPSLLQMKIADGKHKVPEVFNRVMQSSTMNFTSISETSSKDGLTIICSKRGGDILKTSHSNWLQTVPSNPEAILFKFVPISSLLAGIPGSGYLSHAINLYLRYKPAPDDLQYFLEFQIPRQWAPMFCELPLRHQWRNSSSPSLQFSFMGPKLHVSPGQVLSEEKPVVGLRLYLEGRKCDRLAIHVQHLSSLPNTMVLSSSNQTMSRPSMWRGSDEHESSYQFLERVRWKRFSNVCTSVVKHDPNWLHGSSGVYIVTGAQLFGKGSWPRNVLHLRLLFTHIPNCSIRKTEWTTAPEASRKSSFLTNISTTFTFTQQNNTGPRKQAPNVLNSGVYPEGPPVPVRSGKLLKFVETSEVVRGPHDAPGHWLVTAAKLVVEGGKIGLLVKFALLDYW 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0109 609 SMART MACPF_8 122 319 IPR020864 -
Lele24g0109 609 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 8 608 IPR044663 GO:0006952|GO:0012501|GO:2000031
Lele24g0109 609 MobiDBLite consensus disorder prediction 531 550 - -
Lele24g0109 609 Pfam MAC/Perforin domain 105 317 IPR020864 -
Lele24g0109 609 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 331 IPR020864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0109 Lele-ChrLele24 697661 701802 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0115 21 737857 742479 Lele24g0109 24 697661 701802 hybridization
Lele22g0120 22 690909 695054 Lele24g0109 24 697661 701802 hybridization