Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0091 ATGGTGGTTTCCGTGTCTTCTGTAATCTCGCAATCCTCTCGCATTCTCCATCCCAAGCCTCTACTTCACCAGGACACCTTCCATTCTCAATGCCGTCCCATTCCCCTCTTTCACCGTCGTTTGCATCTCCTTCGAAAGAATCTTACTTCACCTCGGGGAAGAGAAACGCTAAACAGTAGGATATGTGCTTCACTTACAGATGTCTCACTGGATGTATCTGTAGAAGAAAAACAGCTTCCCATAGGAGAAACTTGGTCCGCTCACAAATTTGGAGGAACCTGTATGGGAACCGCACTAAGAATTAAAAATGTTGCAGATATAATAATCAAGGATGATTCAGAGAGGAAAGTTGTCGTGGTCTCTGCTATGTCAAAGGTGACAGATATGATGTATGACCTTATTCATAAGGCTCAAACACGCGATGAGTCATATGTATCTGCACTAGATACCGTTTTAGAGAAGCACAATTCTGCTGCTCATGAACTACTTGATGGAGATGAACTTGCTCTTTTCTTATCAAAGTTGCATGATGACATCCATAACCTTAAGGCAATGCTTCGTGCAATTTACATAGCTGGTCATGCAACAGAATCCTTTACAGACTTTGTAGTGGGGCATGGGGAGTTATGGTCTGCTCATATGTTGTCTTCAGTTATTCGGAAGAATGGGACTGACTGCAAATGGATGGATGCGAGGGAAGTCCTTGTTGTAAATCCGACTAGTTCTAATCAAGTTGATCCTGACTATTTGGAATCTGGGCGAAGACTTGAGAAATGGTACTCTATGAATCCAGCCGAGGTTATCATTGCTACTGGATTTATTGCTAGTACACCTCAAAATATACCTACTACCTTGAAGAGAGATGGAAGTGATTTCTCAGCAGCAATTATTGGTGCTCTCTTCAGGGCTCGCCAAGTCACAATTTGGACAGATGTTGATGGTGTCTATAGTGCAGATCCTAGAAAAGTTAGTGAGGCTGTAATTTTGAAGACTTTATCTTATCAAGAAGCATGGGAAATGTCTTATTTTGGTGCAAATGTTTTACATCCCCGGACAATCATTCCAGTGATGCAGTATGACATACCCATTATAATTAGAAACATCTTCAACCTCTCTGCCCCTGGAACAAAGATTTGCCGCTCTTCTATCAATGATGATGAAGATATACAGAACTTCAGTCATTTTGTGAAAGGGTTTGCAACGATAGACAACTTAGCTCTTGTTAACGTTGAGGGAACTGGAATGGCCGGTGTTCCAGGGACAGCCAGTGCTATCTTTTCTGCTGTAAAAGATGTTGGAGCTAATGTTATCATGATATCTCAGGCTAGTAGTGAGCATTCTGTATGCTTTGCTGTACCTGAGAAGGAAGTAAAAGCTGTTGCTGAGGCACTGCAATCCAAATTTCGTCAGGCTTTGGATGCCGGGCGTCTATCTCAGGTTGCAGTTATTCCAAATTGTAGCATTTTGGCTGCTGTTGGCCAAAAGATGGCAAGTACTCCTGGAGTTAGTGCTTCCCTATTCAATGCATTAGCTAAGGCAAATATCAATGTCCGTGCTATAGCACAAGGTTGTAGCGAGTACAATATCACTGTTGTTGTTAAGCGAGAAGATTGTATCAAGGCTCTTAGAGCTGTTCATTCAAGATTTTATCTCTCAAGAACCACCATAGCGATGGGCATCATTGGACCTGGTTTAATTGGGAGTACACTTCTTGACCAACTAAAGGATCAGGCTGCTGTTTTGAAAGAAGAATATAACATTGATTTGCGTGTATTGGGCATCATTGGTTCAACGTCAATGGTTCTTAGTGATCTGGGTATTGACTTAGCTAAGTGGAAAGAAATTCAAGAGGAAAGAAGAGAAGTGGCTAATTTGGAAAAGTTTGTTCGACATGTGCATGGGAATCATTTTATACCAAATACAGTTTTAGTGGACTGCACAGCTGACTCCATCATCGCAAGCCATTACTTTGACTGGTTACGCCAAGGAATGCATATAATCACCCCCAACAAAAAGGCGAATTCAGGACCACTTGATCAGTATTTGAGGTTAAGAGCTCTTCAAAGACAATCCTATACCCATTACTTCTACGAAGCAACTGTTGGAGCTGGTCTTCCGATCATTAACACTTTACAAGGCCTCCTTGAAACTGGAGACAGAATATTGCAAATTGAAGGCATCTTCAGTGGGACCTTGAGCTACATCTTTAATAACTTTAAAGATGGCCGGCTTTTTAGTGAGGTAGTTGCTGAAGCAAAGGAAGCAGGTTATACTGAGCCAGATCCAAGGGATGATCTGTCTGGAACAGATGTTGCTAGAAAGGTGATAATTCTTGCACGGGAATCTGGCCTAAAGCTTGAACTATCTAATATTCCTGTTGAGAGCCTTGTGCCAGAACCACTGAGGGTGAGTGCTTCGGCTCAGGAGTTTATGCAACAACTACCTAAATTTGACGAAGACATGATGAAGAAACAACAGGATGCGGAGAATGCTGGGGAAGTTCTGAGGTACGTCGGAGTGGTGGATGTGACTAACGAAAAAGGAGTGGTCGAGCTGCGAAGATACAAAGAGGATCATCCATTTGCACAACTGTCCGGGTCAGATAATATTATTGCATTCACAACAAGAAGGTACAATAAGCAGCCTCTGATAGTTCGGGGACCAGGAGCGGGTGCTCAAGTCACAGCTGGTGGCGTATTCAATGACATTTTACGTCTTGCCTCGTACCTTGGTGCCCCATCATAG 2745 0.427 MVVSVSSVISQSSRILHPKPLLHQDTFHSQCRPIPLFHRRLHLLRKNLTSPRGRETLNSRICASLTDVSLDVSVEEKQLPIGETWSAHKFGGTCMGTALRIKNVADIIIKDDSERKVVVVSAMSKVTDMMYDLIHKAQTRDESYVSALDTVLEKHNSAAHELLDGDELALFLSKLHDDIHNLKAMLRAIYIAGHATESFTDFVVGHGELWSAHMLSSVIRKNGTDCKWMDAREVLVVNPTSSNQVDPDYLESGRRLEKWYSMNPAEVIIATGFIASTPQNIPTTLKRDGSDFSAAIIGALFRARQVTIWTDVDGVYSADPRKVSEAVILKTLSYQEAWEMSYFGANVLHPRTIIPVMQYDIPIIIRNIFNLSAPGTKICRSSINDDEDIQNFSHFVKGFATIDNLALVNVEGTGMAGVPGTASAIFSAVKDVGANVIMISQASSEHSVCFAVPEKEVKAVAEALQSKFRQALDAGRLSQVAVIPNCSILAAVGQKMASTPGVSASLFNALAKANINVRAIAQGCSEYNITVVVKREDCIKALRAVHSRFYLSRTTIAMGIIGPGLIGSTLLDQLKDQAAVLKEEYNIDLRVLGIIGSTSMVLSDLGIDLAKWKEIQEERREVANLEKFVRHVHGNHFIPNTVLVDCTADSIIASHYFDWLRQGMHIITPNKKANSGPLDQYLRLRALQRQSYTHYFYEATVGAGLPIINTLQGLLETGDRILQIEGIFSGTLSYIFNNFKDGRLFSEVVAEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSNIPVESLVPEPLRVSASAQEFMQQLPKFDEDMMKKQQDAENAGEVLRYVGVVDVTNEKGVVELRRYKEDHPFAQLSGSDNIIAFTTRRYNKQPLIVRGPGAGAQVTAGGVFNDILRLASYLGAPS 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0091 914 Pfam Homoserine dehydrogenase, NAD binding domain 562 698 IPR005106 GO:0016491|GO:0050661
Lele24g0091 914 ProSiteProfiles ACT domain profile. 410 485 IPR002912 -
Lele24g0091 914 CDD AAK_AK-HSDH 85 379 IPR041743 -
Lele24g0091 914 Gene3D Dihydrodipicolinate Reductase; domain 2 717 888 - -
Lele24g0091 914 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 393 551 - -
Lele24g0091 914 Pfam Homoserine dehydrogenase 706 904 IPR001342 GO:0006520
Lele24g0091 914 Pfam ACT domain 414 466 IPR002912 -
Lele24g0091 914 ProSitePatterns Homoserine dehydrogenase signature. 752 774 IPR019811 GO:0006520
Lele24g0091 914 Gene3D - 557 906 - -
Lele24g0091 914 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 717 888 - -
Lele24g0091 914 SUPERFAMILY Carbamate kinase-like 88 380 IPR036393 -
Lele24g0091 914 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 706 891 - -
Lele24g0091 914 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 84 381 - -
Lele24g0091 914 Gene3D - 86 381 IPR036393 -
Lele24g0091 914 FunFam Probable aspartokinase 390 471 - -
Lele24g0091 914 PANTHER - 68 914 IPR011147 GO:0004072|GO:0004412|GO:0009067
Lele24g0091 914 Pfam ACT domain 484 547 IPR027795 -
Lele24g0091 914 Gene3D - 393 551 - -
Lele24g0091 914 CDD ACT_AKi-HSDH-ThrA_2 486 551 - -
Lele24g0091 914 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 554 728 IPR036291 -
Lele24g0091 914 SUPERFAMILY ACT-like 394 469 IPR045865 -
Lele24g0091 914 Pfam Amino acid kinase family 88 367 IPR001048 -
Lele24g0091 914 ProSiteProfiles ACT domain profile. 491 568 IPR002912 -
Lele24g0091 914 SUPERFAMILY ACT-like 476 565 IPR045865 -
Lele24g0091 914 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 557 733 - -
Lele24g0091 914 CDD ACT_AKi-HSDH-ThrA-like_1 405 484 - -
Lele24g0091 914 TIGRFAM asp_kinases: aspartate kinase 88 549 IPR001341 GO:0004072|GO:0008652
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0091 Lele-ChrLele24 583970 592436 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g0091 24 583970 592436 Lele24g0091 24 583970 592436 ECH
Lele21g0095 21 610670 618922 Lele24g0091 24 583970 592436 hybridization
Lele22g0102 22 572625 580978 Lele24g0091 24 583970 592436 hybridization