Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1968 ATGAACCAGACTACTGTTTTCTTGGGACAAAATATCCAGCAGCTTGGTGTCGGTGGCTCCTTTCGCGCCCGCGTCTCCGCTTTCTCTTCGATATTTCCACAAATCCCTTTCTCGCCAACCCCCGTCGTCTTCACAGTTGTTGCTTCTTTGTTCTCTTTTGGAGTTGTTGTCGCAAAAAACCAGATCGAGGGATCTCCACCGTCCATCGGACCCTCCGGACCTTATTTATACTTGGCTAGCTCGCACCATCCTCTTCGCTCTGAGCCCCCTCACTCCCTCTTCTTCTCTCGGGACCTTGAGATACCCTTCCTTCCGTTTCTCAGTTCTCGTTTCTTTCCCTGCCCAGCCATGTCCCTGCTAGTTGACAAAACAGCCGGCGGCCGCGAGTACAAGGTCAAGGACCTGTCTCAGGCCGACTTCGGTCGCCTCGAGATTGAACTCGCCGAGGTCGAAATGCCCGGTCTCATGGCCTGCCGTACTGAATTCGGCCCCTCCCAACCCTTCAAGGGTGCCAAAATCACCGGTTCACTCCACATGACCATCCAGACCGCCGTCCTCATTGAGACCCTCACCGCTCTCGGTGCCCAAGTCCGTTGGTGCTCCTGCAACATCTTCTCCACTCAGGACCACGCCGCCGCCGCCATTGCCCGAGATAGCGCGGCCGTCTTCGCCTGGAAGGGGGAGACGCTTCAGGAGTACTGGTGGTGCACTGAGCGCGCCCTCGATTGGGGTCCGGGCGGCGGGCCTGATCTCATTGTCGATGATGGCGGTGATGCTACTCTCCTGATCCACGAGGGTGTTAAGGCCGAAGAGGCCTACGAGAAGAATGGCCAGCTGCCAGATCCGGCGTCTACGGACAATGCTGAGTTTCAGATTGTTCTCACCATCATCAGGGATGGGTTGAAGGCTGATCCCAAGAAGTACCACAAAATGAAGGAGAGACTCGTCGGTGTGTCGGAGGAGACCACCACTGGTGTTAAGAGGCTGTACCAGATGCAGGCTAATGGCACGTTGTTGTTCCCTGCCATCAATGTTAACGACTCTGTTACCAAGAGCAAGTTCGATAACTTGTATGGTTGCCGTCACTCTCTTCCCGATGGATTGATGAGAGCCACTGATGTCATGATTGCTGGGAAGGTTGCTGTTGTATGCGGGTATGGAGATGTTGGTAAGGGTTGTGCTGCCTCATTGAAGCAGGCTGGAGCTCGTGTGATTGTGACAGAGATTGATCCCATTTGTGCCCTTCAAGCTCTCATGGAAGGTTTACAGGTGCTGACCCTGGAGGATGTTGTTTCCGAGGCTGACATATTTGTTACCACCACCGGAAACAAAGACATTATCATGGTTTCTGACATGAAGAAAATGAAGAACAATGCTATTGTTTGCAATATCGGCCACTTTGACAATGAAATTGATATGATAGGGCTTGAGACATACCCTGGTGTGAAGCGCATCACCATTAAACCTCAAACTGACAGATTTGTCTTCCCCGACACTAACAAAGGCATCATTGTATTGGCTGAGGGTCGTTTGATGAACTTGGGTTGTGCCACAGGGCACCCTAGCTTTGTGATGTCCTGCTCCTTCACCAACCAAGTGATTGCTCAGCTTGAGTTGTGGAAGGAGAAGGCAACTGGCAAGTATGAGAAGAAGGTTTATGTCTTGCCCAAGCACCTGGATGAGAAGGTTGCCGCTCTTCATCTTGGCAAGCTTGGAGCTAAGCTCACTAAGCTCACCAAAGACCAGGCTGACTACATCAGCGTGCCAATTGAGGGTCCATACAAGCCTGCTCACTACAGGTACTGA 1806 0.5238 MNQTTVFLGQNIQQLGVGGSFRARVSAFSSIFPQIPFSPTPVVFTVVASLFSFGVVVAKNQIEGSPPSIGPSGPYLYLASSHHPLRSEPPHSLFFSRDLEIPFLPFLSSRFFPCPAMSLLVDKTAGGREYKVKDLSQADFGRLEIELAEVEMPGLMACRTEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAQVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWCTERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEAYEKNGQLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAASLKQAGARVIVTEIDPICALQALMEGLQVLTLEDVVSEADIFVTTTGNKDIIMVSDMKKMKNNAIVCNIGHFDNEIDMIGLETYPGVKRITIKPQTDRFVFPDTNKGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKATGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLTKDQADYISVPIEGPYKPAHYRY 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1968 601 SMART AdoHcyase_NAD_2 356 519 IPR015878 -
Lele23g1968 601 Gene3D - 131 601 IPR042172 -
Lele23g1968 601 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 470 601 - -
Lele23g1968 601 Pfam S-adenosyl-L-homocysteine hydrolase, NAD binding domain 356 519 IPR015878 -
Lele23g1968 601 FunFam Adenosylhomocysteinase 358 519 - -
Lele23g1968 601 Pfam S-adenosyl-L-homocysteine hydrolase 129 600 IPR000043 -
Lele23g1968 601 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 129 358 - -
Lele23g1968 601 ProSitePatterns S-adenosyl-L-homocysteine hydrolase signature 1. 201 215 IPR020082 -
Lele23g1968 601 Gene3D - 359 520 - -
Lele23g1968 601 PANTHER ADENOSYLHOMOCYSTEINASE 122 601 IPR000043 -
Lele23g1968 601 CDD SAHH 139 589 IPR000043 -
Lele23g1968 601 ProSitePatterns S-adenosyl-L-homocysteine hydrolase signature 2. 378 395 IPR020082 -
Lele23g1968 601 TIGRFAM ahcY: adenosylhomocysteinase 130 593 IPR000043 -
Lele23g1968 601 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 356 519 IPR036291 -
Lele23g1968 601 SMART AdoHcyase_2 129 600 IPR000043 -
Lele23g1968 601 Hamap S-inosyl-L-homocysteine hydrolase [ahcY]. 125 593 IPR000043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1968 Lele-ChrLele23 22595769 22598674 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0084 21 558715 560657 Lele23g1968 23 22595769 22598674 hybridization
Lele22g0088 22 516121 518208 Lele23g1968 23 22595769 22598674 hybridization