Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1960 ATGGCTACGGATGTGGCGGTGCCGGAGCATGGAGAAGTGAAGCAAAGCAATGGGCATGCGTGCTGCTTCAACGGACCTGGCTACGCTACCCCACTTGACGCCATGTCTGGTCCCAGAGAGGCTCTCATCTATATCACTGCTCTTTACGCTGGAACAGGAAGGGAGAAGCCAGACTATCTGGCCACAGTGGATGTGGATCCAAGCTCTCCAACTTATTCAAAAGTTATCCACAGGCTACCTGTACCTTATGTGGGTGATGAACTTCATCATACGGGCTGGAATTCTTGCAGCTCTTGCCATGGAGATCCATCCACTGATCGACGCTATTTGATCCTTCCTTCACTCGTGTCGGGTCGCATATATGTGGTTGACACAAAAACAAATCCAAAGGCCCCTTCTTTGCATAAAGTTGTTGATCCCGAAGAAATCAGTGGGAAAACTGGATTAGCATATCCTCACACATCCCATTGCCTTGCTTCCGGTGATATAATGATTTCATGTCTTGGAGATAAGGAAGGAAATGCTGAAGGGAATGGATTTCTTCTTCTTGACTCAGAATTCAATGTGAAAGGGAGGTGGGAGAAACCTGGGCATAGTCCTCTATTTGGGTATGACTTTTGGTATCAACCACGGCATGGCGCAATGATTAGCACATCATGGGGGGCTCCTTCTGCATTCACCAAAGGTTTTAACCCGCAGCATGTGGCTGATGGCTTGTACGGGAGGCATCTCCACGTGTACAGCTGGCCTGGGGGCGAACTGAGACAAACTCTGGACCTTGGCAACACAGGGCTTATTCCCCTGGAGGTACGATTTCTGCATGATCCTTCTAAAGATACAGGTTTCGTTGGTTGTGCTTTGTCGAGTAACATGGTACGATTTTTCAAGGCTGAGGATGGGTCATGGAGCCATGAGGTTGCAATATCAGTGAAACCATTGAAGGTGCAAAACTGGATTCTTCCTGAAATGCCTGGGCTTATTACTGATTTTCTGATATCCCTTGATGATCGATTTCTATACTTTGTGAACTGGCTTCACGGGGATATAAGACAGTATGACATCACAGACATAAAGAATCCTCGACTTACCGGACAAATATGGGTTGGGGGACTGATAAAGAAAGGAAGCCCCGTAGCTGCTGTAGCAGAAGATGGCACAACTTGGCAATCTGATGTTCCAGAGATCCTGGGCAAGGAGTTAAGAGGGGGGCCTCAGATGATTCAACTGAGTTTAGATGGGAAAAGGTTGTACGTCACCAACTCACTGTTCAGTGCATGGGATAAGCAGTTTTATCCGGAGCTAGTGGAGAAAGGGTCCCACATTTTACAGATAGATGTTGATACTGAGAAGGGTGGCCTGAAAATAAACCCCAACTTCTTCGTTGACTTTGGAGCCGAGCCTGAGGGACCAGCCCTTGCCCATGAGATGAGATATCCTGGCGGTGACTGCACTTCCGACATATGGATTTAA 1470 0.4769 MATDVAVPEHGEVKQSNGHACCFNGPGYATPLDAMSGPREALIYITALYAGTGREKPDYLATVDVDPSSPTYSKVIHRLPVPYVGDELHHTGWNSCSSCHGDPSTDRRYLILPSLVSGRIYVVDTKTNPKAPSLHKVVDPEEISGKTGLAYPHTSHCLASGDIMISCLGDKEGNAEGNGFLLLDSEFNVKGRWEKPGHSPLFGYDFWYQPRHGAMISTSWGAPSAFTKGFNPQHVADGLYGRHLHVYSWPGGELRQTLDLGNTGLIPLEVRFLHDPSKDTGFVGCALSSNMVRFFKAEDGSWSHEVAISVKPLKVQNWILPEMPGLITDFLISLDDRFLYFVNWLHGDIRQYDITDIKNPRLTGQIWVGGLIKKGSPVAAVAEDGTTWQSDVPEILGKELRGGPQMIQLSLDGKRLYVTNSLFSAWDKQFYPELVEKGSHILQIDVDTEKGGLKINPNFFVDFGAEPEGPALAHEMRYPGGDCTSDIWI 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1960 489 Pfam 56kDa selenium binding protein (SBP56) 24 489 IPR008826 GO:0008430
Lele23g1960 489 SUPERFAMILY 3-carboxy-cis,cis-mucoante lactonizing enzyme 59 421 - -
Lele23g1960 489 PANTHER METHANETHIOL OXIDASE 21 489 IPR008826 GO:0008430
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1960 Lele-ChrLele23 22567125 22569904 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0092 21 585630 588389 Lele23g1960 23 22567125 22569904 hybridization
Lele22g0099 22 552703 557534 Lele23g1960 23 22567125 22569904 hybridization