Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1957 ATGGTGGTTTCCGTTTCTTCTGTAATCTCGCAATACTCTCGCATTTTCCATCCCAACACTCCACTTCACCAGCACAGCGACACCTTCCAATCTCAATGCCGTCTCATTCCCCTCTTGCACCGTCGTTCGCATCTCCTTCGAAAGAGTCTTACTTCACCTCGGGGAAGAGAAACACTATACAGTAGGATATGTGCTTCACTTACAGATGTTTCACTGGATGTATCTGTAGAGGAAAAACAGCTTCCAAAAGGAGAAACTTGGTCTGTTCACAAATTTGGAGGAACCTGTGTGGGAACCGCACTAAGAATTAAAAATGTTGCAGATATAATAATCAAGGATGATTCAGAGAGGAAAGTCGTCGTCGTCTCTGCTATGTCAAAGGTGACAGATATGATGTATGACCTTATTCTCAAGGCTCAAGGACATGATGAATCCTATATATCTGCACTAGATGCTGTTTTAGAAAAGCACAGCTCTGCTGCTCATGAACTACTTGATGGAGATGAACTTGCTCTTTTCTTATCAAAGTTGCATGATGACATCAATAACCTTAAGGCAATGCTTTGTGCAATTTACATAGCTCGTCATGCAACAGAATCCTTTACAGACTTTGTAGTGGGGCATGGGGAGTTATGGTCTGCTCATATGTTGTCTTCGGTTATTCGGAAGAGTGGGATTGACTGCAAATGGATGGATGCAAGGGAAGTCCTAGTTGTAAATCCGGCTGGTTCTATTCAAGTTGATCCTGACTATTTGGAATCTGGGCGAAGACTTGAGAAATGGTACTCTTTGAATCCATCCAAGGTTATCATTGCTACTGGATTTATTGCTAGTACACCTCAAAATATACCTACTACACTGAAGAGAGATGGTAGTGATTTCTCGGCGGCAATTATGGGTTCTCTCTTCAGGGCTCGCCAAGTCACAATTTGGACAGATGTTGATGGTGTCTATAGTGCAGATCCTAGAAAAGTTAGTGAGGCTGTAATTTTGAAGACATTATCTTATCAAGAAGCATGGGAAATGTCTTATTTTGGTGCAAATGTTTTACATCCCCGTACAATCATTCCAGTGATGCAATATGACATACCCATTATAATTAGAAACATTTTCAACCTCTCTGCCCCTGGAACAAAGATTTGCCGCTCCTTTTTCAATGATGATGAAGATATACAGAACTTCAGTCATTTTGTTAAAGGGTTTGCAACGATAGACAACTTAGCACTTGTTAACGTTGAGGGAACTGGAATGGCCGGTGTTCCAGGGACAGCCAGTACTATTTTTTCCGCTGTAAAAAATGTTGGAGCTAATGTTATCATGATATCTCAGGCTAGTAGTGAGCATTCTATATGCTTTGCTGTACCTGAGAAGGAAGTAAAAGCAGTTGCTGAAGCATTGCAATCCAAATTTCGTCAAGCTTTGGATGCTGGGCGTCTATCTCAGGTTGCAGTTATTCCAAATTGTAGCATTTTGGCTGCTGTTGGCCAGAAGATGGCAAGTACTCCTGGAGTTAGTGCTTCCCTGTTCAATGCATTAGCTAAGGCAAATATCAATGTCCGTGCTATAGCACAAGGCTGTAGCGAGTACAATATCACTGTTGTTGTTAAGCGAGAAGATTGTATCAAGGCTCTTCGAGCTGTTCATTCAAGATTTTATCACTCAAGAACCACCATAGCGATGGGCATCATTGGACCTGGTTTAATTGGGAGTACACTTCTTGACCAACTAAGGGATCAGGCTGCTGTTTTGAAAGAAGAATACAACATTGATTTGCGTGTATTGGGCATCATTGGTTCAAACTCAATGGTTCTTAGTGATCTGGGTATTGACTTAGCTAAGTGGAGAGAAATTCGGGAGGAAAGAGGAGAAGGGGCTAATTTGGACAATTTTGTTCAACATGTTCATGGAAATCATTTTATACCAAACACAGTTTTAGTGGACTGCACAGCTGACTCCATCATTGCTGGCCATTACTACGACTGGTTATGCAAAGGAATACATATAATCACCCCCAACAAAAAGGCGAATTCAGGACCACTTGATCAGTATTTGAGGCTAAGAGCTCTTCAAAGACAATCCTATACCCATTACTTCTTTGAAGCTACTGTTGGAGCTGGTCTTCCAATCATTAGCACTTTACAAGGCCTCCTTGAAACTGGAGACAGAATATTGCAAATTGAAGGCATCTTCAGTGGGACTTTGAGCTACATCTTTAATAACTTTAAAGATGGTCGACTTTTTAGTGAGGTTGTTGCTGAAGCAAAGGAAGCAGGTTATACTGAGCCAGATCCAAGGGATGATCTGTCTGGAACAGATGTTGCTAGAAAGGTGATAATTCTTGCACGGGAGTCTGGTCTAAAGCTTGAACTATCTAATATTCCTGTGGAGAGCCTTGTGCCAGAACCACTAAGGGCGACTGCATCGGCTCAGGAGTTTATGCAACAACTACCTAAATTTGACAAAGACATGATGAAGAAACAACAGGATGCTGAGAATGCTGGGGAAGTTCTGAGGTACGTCGGGGTGGTGGACGTGACTAACGAAAAAGGAATGGTCGAGCTGCGAAGATACAAGAAGGATCATCCATTTGCACAACTGTCCGGGTCAGATAATATTATTGCACTCACAACAAGAAGGTACAATAAGCAGCCTTTGATAGTTCGGGGACCAGGAGCGGGTGCTCAAGTCACAGCTGGTGGCGTATTCAATGACATTTTACGCCTTGCCTCATACCTTGGTGCCCCATCATAG 2751 0.4235 MVVSVSSVISQYSRIFHPNTPLHQHSDTFQSQCRLIPLLHRRSHLLRKSLTSPRGRETLYSRICASLTDVSLDVSVEEKQLPKGETWSVHKFGGTCVGTALRIKNVADIIIKDDSERKVVVVSAMSKVTDMMYDLILKAQGHDESYISALDAVLEKHSSAAHELLDGDELALFLSKLHDDINNLKAMLCAIYIARHATESFTDFVVGHGELWSAHMLSSVIRKSGIDCKWMDAREVLVVNPAGSIQVDPDYLESGRRLEKWYSLNPSKVIIATGFIASTPQNIPTTLKRDGSDFSAAIMGSLFRARQVTIWTDVDGVYSADPRKVSEAVILKTLSYQEAWEMSYFGANVLHPRTIIPVMQYDIPIIIRNIFNLSAPGTKICRSFFNDDEDIQNFSHFVKGFATIDNLALVNVEGTGMAGVPGTASTIFSAVKNVGANVIMISQASSEHSICFAVPEKEVKAVAEALQSKFRQALDAGRLSQVAVIPNCSILAAVGQKMASTPGVSASLFNALAKANINVRAIAQGCSEYNITVVVKREDCIKALRAVHSRFYHSRTTIAMGIIGPGLIGSTLLDQLRDQAAVLKEEYNIDLRVLGIIGSNSMVLSDLGIDLAKWREIREERGEGANLDNFVQHVHGNHFIPNTVLVDCTADSIIAGHYYDWLCKGIHIITPNKKANSGPLDQYLRLRALQRQSYTHYFFEATVGAGLPIISTLQGLLETGDRILQIEGIFSGTLSYIFNNFKDGRLFSEVVAEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSNIPVESLVPEPLRATASAQEFMQQLPKFDKDMMKKQQDAENAGEVLRYVGVVDVTNEKGMVELRRYKKDHPFAQLSGSDNIIALTTRRYNKQPLIVRGPGAGAQVTAGGVFNDILRLASYLGAPS 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1957 916 Pfam Homoserine dehydrogenase, NAD binding domain 564 700 IPR005106 GO:0016491|GO:0050661
Lele23g1957 916 Pfam ACT domain 486 549 IPR027795 -
Lele23g1957 916 Pfam Amino acid kinase family 88 369 IPR001048 -
Lele23g1957 916 TIGRFAM asp_kinases: aspartate kinase 87 551 IPR001341 GO:0004072|GO:0008652
Lele23g1957 916 Gene3D - 89 380 IPR036393 -
Lele23g1957 916 SUPERFAMILY Carbamate kinase-like 87 382 IPR036393 -
Lele23g1957 916 CDD AAK_AK-HSDH 87 381 IPR041743 -
Lele23g1957 916 FunFam Probable aspartokinase 392 473 - -
Lele23g1957 916 PANTHER - 70 916 IPR011147 GO:0004072|GO:0004412|GO:0009067
Lele23g1957 916 Gene3D - 477 558 - -
Lele23g1957 916 Gene3D - 391 475 - -
Lele23g1957 916 Gene3D Aspartokinase, catalytic domain 126 225 IPR042199 -
Lele23g1957 916 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 86 383 - -
Lele23g1957 916 ProSitePatterns Homoserine dehydrogenase signature. 754 776 IPR019811 GO:0006520
Lele23g1957 916 Gene3D Dihydrodipicolinate Reductase; domain 2 719 890 - -
Lele23g1957 916 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 719 890 - -
Lele23g1957 916 Pfam Homoserine dehydrogenase 708 906 IPR001342 GO:0006520
Lele23g1957 916 Gene3D - 559 908 - -
Lele23g1957 916 Pfam ACT domain 416 468 IPR002912 -
Lele23g1957 916 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 708 893 - -
Lele23g1957 916 CDD ACT_AKi-HSDH-ThrA_2 488 552 - -
Lele23g1957 916 ProSitePatterns Aspartokinase signature. 89 97 IPR018042 GO:0004072|GO:0008652
Lele23g1957 916 ProSiteProfiles ACT domain profile. 493 570 IPR002912 -
Lele23g1957 916 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 556 730 IPR036291 -
Lele23g1957 916 SUPERFAMILY ACT-like 478 567 IPR045865 -
Lele23g1957 916 CDD ACT_AKi-HSDH-ThrA-like_1 407 486 - -
Lele23g1957 916 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 559 735 - -
Lele23g1957 916 SUPERFAMILY ACT-like 396 471 IPR045865 -
Lele23g1957 916 ProSiteProfiles ACT domain profile. 412 487 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1957 Lele-ChrLele23 22536246 22544825 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g1957 23 22536246 22544825 Lele23g1957 23 22536246 22544825 ECH
Lele21g0095 21 610670 618922 Lele23g1957 23 22536246 22544825 hybridization
Lele22g0102 22 572625 580978 Lele23g1957 23 22536246 22544825 hybridization