Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1922 ATGGAGGTAACTAAAAGTGGGGTTCTGCTTCTTCTAGCTCTGGTATTGCTGAACCAGCTGGTTGTGAATGGGGATGAGGCCAGTACGAAGACTCTGGTAAAGTATAAGAACGGGAAGAAGCTTTGTGACAAAGGGTGGGAATGCAGGGGATGGTCTAAATACTGTTGTAATCTGACTATTACTGATTACTTCCAGACCTACCAGTTTGAGAATCTCTTTTCTAAGCGTAACACACCTGTGGCACACGCGGTAGGTTTCTGGGATTATCATTCTTTCATAACTGCTGCTGCACTTTTTGAGCCATTGGGATTCGGCACCACTGGTAACAAGACTATGCAGATGAAGGAAATTGCAGCTTTCCTGGGTCACGTCGGCAGTAAAACTTCTTGTGGTTATGGAGTGGCCACTGGAGGACCTTTGGCCTGGGGTCTTTGTTACAATCATGAAATGAGTCCTAGTCAGTCATACTGTGATGACTATTTCAAGTACACCTACCCTTGTGCTCCCGGCGCTGATTATTATGGACGTGGTGCCCTGCCTATCTTCTGGAACTACAATTATGGGGCTGCTGGAGAAGCTTTGAAGGTAGATCTGCTAAGTCATCCAGAATACGTAGAGCAGAATGCAACCCTAGCCTTCCAGGCTGCAATTTGGAGGTGGATGACCCCAATCAAGAAGAAACAACCTTCTGCCCATGACGCCTTTGTGGGCAACTGGAAGCCCACCAGGAACGACACGCTGGAGAATCGGGTTCCTGGTTTTGGCGCTACAATGAACATTCTGTATGGTGATGGTGTATGTGGGAAAGGTGACGTTGACTCCATGAACAGCATCGTTTCCCATTACCTGTATTATCTTGACCTGCTGGGTGTGGGGCGTGAGGATGCAGGGGCCCATGAAGTGCTCACTTGTGCTGAGCAGGTTCCTTTTAACCCGTCCTCTGCTACCGCCACTGCAGCATCTTGA 966 0.4845 MEVTKSGVLLLLALVLLNQLVVNGDEASTKTLVKYKNGKKLCDKGWECRGWSKYCCNLTITDYFQTYQFENLFSKRNTPVAHAVGFWDYHSFITAAALFEPLGFGTTGNKTMQMKEIAAFLGHVGSKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDYFKYTYPCAPGADYYGRGALPIFWNYNYGAAGEALKVDLLSHPEYVEQNATLAFQAAIWRWMTPIKKKQPSAHDAFVGNWKPTRNDTLENRVPGFGATMNILYGDGVCGKGDVDSMNSIVSHYLYYLDLLGVGREDAGAHEVLTCAEQVPFNPSSATATAAS 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1922 321 PANTHER CHITINASE-RELATED 11 307 - -
Lele23g1922 321 PIRSF Endochitinase 1 311 IPR016283 GO:0004568|GO:0005975
Lele23g1922 321 Gene3D - 68 310 - -
Lele23g1922 321 CDD chitinase_GH19 68 304 - -
Lele23g1922 321 Pfam Chitinase class I 68 295 IPR000726 GO:0004568|GO:0006032|GO:0016998
Lele23g1922 321 FunFam Endochitinase (Chitinase) 148 207 - -
Lele23g1922 321 SUPERFAMILY Lysozyme-like 60 311 IPR023346 -
Lele23g1922 321 Gene3D Endochitinase, domain 2 148 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1922 Lele-ChrLele23 22350628 22353850 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1922 1 314 Glycoside Hydrolase AT1G05850 72.152 1.83e-180 499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g1922 23 22350628 22353850 Lele23g1922 23 22350628 22353850 ECH
Lele21g0129 21 808012 810557 Lele23g1922 23 22350628 22353850 hybridization
Lele22g0131 22 757544 760126 Lele23g1922 23 22350628 22353850 hybridization