Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1413 ATGATAAGCCCAATAAGGCAACATGCTCCGACGCAACGCAGAGAAGGTGCCTGGTGCAGTTTCGAGGCTCACGCGGCTCCTATTTCTCGATTCTTCCTAGCTCGTAGTGTCGCCCTATCGCCGTCCTTCAAGATCATCATAGCAAAAAAGCTTGAAAGAGAAAAGATGGAGGCTGCAGATGAGGGAATAGAGAGGATAGAGGATTCCAAGGACTTACAGCAACAGAGCAAAGCGTTTGATAAGCTCACTGACCGCGTCGAGGATCGCCAGCTCGACTCCACTCGCGTCCAAGAGGCCATGGCGTCAATTGCTGCATCTGCAGAAGCGGACTGGAATGCGATGCGTTTGAGGGAGAAAGAACTGGCTGCTGTTAAGATAAATGCAGCTGATGTTGACATAATAGCAAATGAACTAGAGCTGGACAAAAAGGTGGCTGAAAGAACCTTGCGTGAGCATAAAGGTGACGCCGTTGCTGCCATTAGGCATTTGCTTCGCTAA 498 0.498 MISPIRQHAPTQRREGAWCSFEAHAAPISRFFLARSVALSPSFKIIIAKKLEREKMEAADEGIERIEDSKDLQQQSKAFDKLTDRVEDRQLDSTRVQEAMASIAASAEADWNAMRLREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRHLLR 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1413 165 Coils Coil 135 155 - -
Lele23g1413 165 CDD UBA_HYPK 124 164 IPR038922 -
Lele23g1413 165 Pfam HYPK UBA domain 124 164 IPR044034 -
Lele23g1413 165 PANTHER HUNTINGTIN-INTERACTING PROTEIN K FAMILY MEMBER 52 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1413 Lele-ChrLele23 18887757 18890769 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g1413 23 18887757 18890769 Lele23g1413 23 18887757 18890769 ECH
Lele21g0628 21 4185367 4185935 Lele23g1413 23 18887757 18890769 hybridization
Lele22g0622 22 4116490 4119034 Lele23g1413 23 18887757 18890769 hybridization