Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1406 ATGGAGAAAGATTTTGCCATGGACATCGATCTTCAACCTCAAGAAGAAGGCAAGGAGGAGGAGGAAGATTATTTCCTGAGATTTATTGAATATGCGAGGTCCGAGCTTCTGGAAGACGAAGGAGATCCCGGTCCAAATGGTGATGGTGCGGTTGTTGATCAACCTGGCTGGAGCTGGATCGTGTATCGGATTCTCAAGACTTGCGTTGCTTATTCTAGTGGCGTTACGCCTGCGATACTGCTCTCTGAACTCTCTGTGGCTTGGATTGAGCAACGCAGAATCGGTGCTCCAACGAAGAGGCTAGAATTTATCAAGCATTTAAAGAAGAATAACCGGAGAACGAAACTGCCAAACACTGTCACCATTGATTCAATATATGAGAAAAATTTCTTGTCCTTAAACAGTGTTTTGGAAGCGGTTATTGTTGATGCATCTGTTCTTCCAGGCACAAACATCCAAATGCTAACGTTAGGAGACTATTGGAGTTCCAATCTCGTAGATCTCTATCTCCACCGCAGATTCTATAACTTGTTGGATATGGAGAATGGAATTCTGAAGAAAGGGAGGGAGGTTTTCCTCACTGGTTGCTATCTTCGAACTGCCTCTGAAGGTGTTAGTCATCCACGCCTTTTGCCAACGGAGTATCTCGTGATACTATTGGATGAGAATCAAGATGATGATGCAATGCTGCTAGCTGCTCAATTTGGTTCAGATTCTTTCTCTTCAATATCTCTTAATGCAGCAAATGAAGGGGTTTCTTATTCACTTTATGCCAGGATTGAAAGCATTGGGTCAGTGGAAACTCAAGGCAAGTTTGGAAATGTACAGAGGAAGCAGATTACTTTAGTAGATGACAATGATGTGAAGTTACAGTTTCTCTTGTGGGGTGATCAGACTGTCCTTTCCAATCTCTTCAGAGTGGGAAGCATGCTTGCACTAGACAAACCATATATTTCAAGTTCTACGGAGTGTGATATTGAAACAAGTGAGGAATTTTGTCTTGAATATGGAACTGCAACACAATTATATCTGGTTCCTTACATTCAACACGAAGAACAGGTGCGCGTTTCGTTGACACCAAATCGTCATCAAAGTTCAAGGTCCTTGAGTTCATGGACTCCTAGTCAGAGTCCCAAATTTTCTCAAGTGAGCTTGCCCCGTGATTCTTTTGGGACCATTGATTACAGTAATTATCCTTTTCGGTCGTTTGTGGCTGACCTTCAGGACAAAATGACTAGCGTCAGCCTCTATGGTGTTGTTACAGATATTATCAAAGATGTAAGCTCAGAAACTACCTTCTCTATAAGAGTTGAAGATACTAGCGGAGCAATTTGGGCAAAGCTTCATTTTACCACATCTTGGTCATTGGGAAGATTAAGTCTCGGTCACACAATTTTTATATCTGGGTTGACATGCTCCAAGTCGAAACAAAAGCGCCTGGAAGTATCGTGGTTTGAGTATGATGATGGGGCATCTTTCATCAATATCAGTTGCTTACCAGCTTTGATCAACTCATCTTGTCTTCATAAGCTATCACGCCTCTCTGATATAACTAGCCAGACTGGCTATGCGCAAATATGTCAAATCTGGCTTGAACCGATGGAACATTTTCATGTTAACACTAGATTTTCACATTCACTATGTGGTCACTTCGTCAACAAGATGCCTAGTGGCCTCTTAGAATGCAGCTTCTGTCATCAAGTTTGTGACGCTGAAGTAGTGCGAACTTTCGACTTGAAAATTACCGTTGCAGACGAGAGTGCTAAAGTTTTAGCATGGTCTACTGGTCAAACGGCTATGGATTTACTGCAGATATCTCCTGAGGAGTTTTATGAACTTCCTGAGGAGGAACAAGTAATGTACCCGTCGTCATTAGAGAATGAGAGCTTCATGGTTGCATTAGTGAAATGTAAAAACGAGAGCTATAGATTGATACAAGGCCCTTCGTTAGACAATTCAACCGCCTGGGAAATCACACCAAGCCAGGAAGTTGATAAAAAGGAAGCGATTGCTTTTTCCCACAAAGTAAATGTATGGGACAACGTATATGTTTCGCTAATATATAGGGGTTCAATCTCTACGATGCTAACTCCGATCAGCATTAGTGAAAGTGGCAGTACCAAAGTAAAGAGCACGGTCATCCATTTGGTATGGGATTTTACATATTCTGCATATGGCCCTGCAATTGCTTTTGTGGTTCTTGCTTCTTACACGACATGCATATTGGAATACTCGACCTCTGTACAAAATATGTCATGGATGCCACAGTTCTGGCTGTGGCGCTGGCACAGAAATAAAGAAGCAAGTTGGCATCGCAGAGTGATTATTTGCCAACTTAAACAGCTCACATCCAGAGTTCCAGAGAAACTTACAACATTGCATAATGATCTTGGGAATGAAATGTATACGCCTGATACAGTTTCCATTGGTCCCTTCCATCACGAAAATGGAAACCTAAAAGTCAATGAAGAACAAAAGTGGCATTACCATGATACTCTGCTCAGTCGCAAGCCGAACCTGGAGGCAACATTGCACGAATGTGTAAAGGCACTACAAGATTTAGAGCAAACAGCAAGACATTGCTACGAAGAAACACTCCATCTCAACAGGAACAAGTTTTTGGAAATACTGCTCATTGATGGCTGCTTCATCATCGAGCTTTTCTTGAAATATGCTTTTAAGGGTCTGAGACGCCGTGGTGACCCCATATTCACCTTGGAGCTGTTCTTTGACGTCAGGAAAAACCTCATTTTGTTAGAAAACCAGATTCCATGGATGGTTCTTCAGAGTTTGCTCGAGATTGTGCCCAAACCGAAACCGTTTCCTCTCAGCGAGTTTGTCCTCGGTTTCTTCAAGAAAATGTTACCAGGAGAACTGGATTTTCTCAGAGAGAAGTTCAGTCAAGAAGGTAACGATTTGCTCGACCTTATCCACCAATGCTACATCCCTGCATATTGGATAGTTGAATCAAAAAAAGCTGATGGAGAACCAAAAGCAAAAGATATCGAGTGTGTAACAAATCTTAAAAAACGTGGAATCAAGTTCATGAAGTTCACAGCCACAAGCTTGTTAGACATAAGCTTTTCTGATGGGGTTTTTGAGATTCCTCCCCTGGAAACCAAGAAGTACAATAAGGTTCTGTTTGCAAACCTTATTGCACTTGAGCAGCATCATTCTGATCAGATTCAATGCTTCACATCTTATGCCTTGCTCATGAAAACCTTCATCCACTGCGATGAAGATGCCGAATTGTTCGCGCGTCTGAGGATTGTGGTCGGTGACAGTGAAGATGAGACCAAGGAGAACTTGGAGAAAGAAGCTAGTTTACTCTTTAGCAATCTCTGCGATGGAGTGGCTGTGAAGAGGTTCTATTATGCAGGTGTTGTTGGGCAGCAAATGTTAGCTAATGGTGATGGAAAGCCAGAACTTATACAGGGCCTCAGCCTCATAAATTGCGGTCTTCGTCATCAAGCTTTCTCTCTGAAGCATTCACATCAGGAAAGAAAAAAAACCAAAGCCCTATCTCAGAACGCTGCAACTTTGTCTTGTTTGTTGCGAAAGCTAGAAATGGCAGCTCATAGGAGAGTTGGTGTGGCCGTTGATTTCTCACCTTGCAGCAACAAAGCTCTCCAATGGACCGTGGATAACCTGGTCCGAGAAGGAGATCACCTCATTCTTCTCAACATTAGCCAAGAATCGGATTACGAGAATGGCGAGATTCAGCTCTGGGCAGCTTCTGGCTCTCCTTTGATTCCTCTGGCTGAGTTCTGTGATCCAGTGGTCATGAAGAAGTATGGAGTTAAACCTGCTGCAGAAACACTGGATATTGTCCAAACTGCTGCCAGGCAGAAGAAGGTTGAAGTCCTGTTGAAGATCTATTGGGGAGATGCTCGTGAGAAGATTTGCGAAGCAGTTAATACCATTCCTCTGGACTGCCTTATTATGGGCAACAGAGGCCTTGGGACCATCAAAAGGGCTATAATGGGCAGCGTTAGCAACTATGTAATGAATAACGCGTCTTGCCCTGTGACAGTGGTGAAGGCAGATTCCCATTAA 4056 0.429 MEKDFAMDIDLQPQEEGKEEEEDYFLRFIEYARSELLEDEGDPGPNGDGAVVDQPGWSWIVYRILKTCVAYSSGVTPAILLSELSVAWIEQRRIGAPTKRLEFIKHLKKNNRRTKLPNTVTIDSIYEKNFLSLNSVLEAVIVDASVLPGTNIQMLTLGDYWSSNLVDLYLHRRFYNLLDMENGILKKGREVFLTGCYLRTASEGVSHPRLLPTEYLVILLDENQDDDAMLLAAQFGSDSFSSISLNAANEGVSYSLYARIESIGSVETQGKFGNVQRKQITLVDDNDVKLQFLLWGDQTVLSNLFRVGSMLALDKPYISSSTECDIETSEEFCLEYGTATQLYLVPYIQHEEQVRVSLTPNRHQSSRSLSSWTPSQSPKFSQVSLPRDSFGTIDYSNYPFRSFVADLQDKMTSVSLYGVVTDIIKDVSSETTFSIRVEDTSGAIWAKLHFTTSWSLGRLSLGHTIFISGLTCSKSKQKRLEVSWFEYDDGASFINISCLPALINSSCLHKLSRLSDITSQTGYAQICQIWLEPMEHFHVNTRFSHSLCGHFVNKMPSGLLECSFCHQVCDAEVVRTFDLKITVADESAKVLAWSTGQTAMDLLQISPEEFYELPEEEQVMYPSSLENESFMVALVKCKNESYRLIQGPSLDNSTAWEITPSQEVDKKEAIAFSHKVNVWDNVYVSLIYRGSISTMLTPISISESGSTKVKSTVIHLVWDFTYSAYGPAIAFVVLASYTTCILEYSTSVQNMSWMPQFWLWRWHRNKEASWHRRVIICQLKQLTSRVPEKLTTLHNDLGNEMYTPDTVSIGPFHHENGNLKVNEEQKWHYHDTLLSRKPNLEATLHECVKALQDLEQTARHCYEETLHLNRNKFLEILLIDGCFIIELFLKYAFKGLRRRGDPIFTLELFFDVRKNLILLENQIPWMVLQSLLEIVPKPKPFPLSEFVLGFFKKMLPGELDFLREKFSQEGNDLLDLIHQCYIPAYWIVESKKADGEPKAKDIECVTNLKKRGIKFMKFTATSLLDISFSDGVFEIPPLETKKYNKVLFANLIALEQHHSDQIQCFTSYALLMKTFIHCDEDAELFARLRIVVGDSEDETKENLEKEASLLFSNLCDGVAVKRFYYAGVVGQQMLANGDGKPELIQGLSLINCGLRHQAFSLKHSHQERKKTKALSQNAATLSCLLRKLEMAAHRRVGVAVDFSPCSNKALQWTVDNLVREGDHLILLNISQESDYENGEIQLWAASGSPLIPLAEFCDPVVMKKYGVKPAAETLDIVQTAARQKKVEVLLKIYWGDAREKICEAVNTIPLDCLIMGNRGLGTIKRAIMGSVSNYVMNNASCPVTVVKADSH 1351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1406 1351 Pfam Cell division control protein 24, OB domain 3 406 625 IPR035203 -
Lele23g1406 1351 Pfam Cell division control protein 24, OB domain 1 25 151 IPR035201 -
Lele23g1406 1351 CDD USP_Like 1195 1346 - -
Lele23g1406 1351 Gene3D - 536 668 IPR012340 -
Lele23g1406 1351 PANTHER NUCLEIC ACID-BINDING PROTEINS SUPERFAMILY 25 662 - -
Lele23g1406 1351 MobiDBLite consensus disorder prediction 359 383 - -
Lele23g1406 1351 MobiDBLite consensus disorder prediction 1 20 - -
Lele23g1406 1351 PRINTS Universal stress protein signature 1307 1319 IPR006015 -
Lele23g1406 1351 PRINTS Universal stress protein signature 1325 1347 IPR006015 -
Lele23g1406 1351 PRINTS Universal stress protein signature 1193 1211 IPR006015 -
Lele23g1406 1351 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 1194 1349 - -
Lele23g1406 1351 FunFam Universal stress protein family protein 1190 1350 - -
Lele23g1406 1351 Pfam Plant protein of unknown function 785 1128 IPR004158 -
Lele23g1406 1351 SUPERFAMILY Nucleic acid-binding proteins 545 638 IPR012340 -
Lele23g1406 1351 Gene3D HUPs 1188 1351 IPR014729 -
Lele23g1406 1351 Pfam Cell division control protein 24, OB domain 2 156 284 IPR035200 -
Lele23g1406 1351 Pfam Universal stress protein family 1194 1347 IPR006016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1406 Lele-ChrLele23 18818027 18832531 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g1406 23 18818027 18832531 Lele23g1406 23 18818027 18832531 ECH
Lele21g0635 21 4237502 4248663 Lele23g1406 23 18818027 18832531 hybridization
Lele22g0630 22 4180965 4186269 Lele23g1406 23 18818027 18832531 hybridization