Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1377 ATGGTGGGGCGCGACATAGCCGATCTGCCAAAGAACGCGGCGAACTACACAGCCTTGACGCCGTTGTGGTTTCTAGAAAGAGCAGCTCAGGTGCATCCCACCAGAAGATCGGTGGTCCATGGATCCTGCCACTATACCTGGCTTCAGACTTACCAGCGTTGCCGCCGATTGGCCTCTGCTCTTTCACTGCGTTCCGTCGGCGTCGGCTCTACGGTAGCAGTTATTGCACCCAACACTCCTGCCCTTTATGAAGCTCACTTTGGAATTCCCATGGCAGGAGCTGTACTGAATACTGTTAACATTCGACTAAATGCGTCAACCATAGCTTTTCTTCTTGGTCATTCATCTGCAGCAGTTGTAATGGTGGATCAAGAGTTATTTTCCTTGGCAGAGGAAGCTTTGAAAATCTGGTCCGAGAAAAGCAAAAATTTTAAGCCTCCAATGTTAATAGTCATTGGTGACAAAAATTGTGATCCTAAGGCATTAAGGGATGCTTTGGCGAAAGGAGCTATCGACTATGAGAAATTTCTAGAAAGTGGTGACCCTGAATTTGCTTGGAAACCACCAGAAGATGAGTGGCTGAGCATTGCTTTGGGTTATACATCTGGAACTACTGCAAGTCCTAAGGGTGTGGTATTACATCACCGAGGAGCATATCTCATGTCTCTAAGTGGAGCTCTCATTTGGGGAATGAACGAAGGAGCTGTCTATCTATGGACACTACCTATGTTTCATTGCAATGGTTGGTGCTACACTTGGACACTTGCAGCTCTTTGTGGCACAAATATATGCCTTCGCCAGGTTACAGCAAGGGCAGTATATGAAGCCATTGCCAAGTATAAAGTGACACATTTTTGTGCAGCACCAGTGGTACTGAACTCAATAGTTAACGCCCGGCCTGAAGAAACCATCCTTCCTCTTCCCCATGTTGTCCATGTGAATACAGCAGGGGCTGCTCCTCCTCCTTCTGTTCTTTCTGCCATGACACAACGAGGATTTCGTGTCACTCACACTTATGGTCTCTCGGAAACCTATGGTCCCTCCACGGTATGTGCCTGGAAGCCTGAGTGGGACTCGCTTCCCCCTGAAAAACAAGCCCGGCTCCATGCAAGACAAGGCGTTCGCTATATTGGTTTGGAAGGTCTCGATGTCATAAACCCGAAAACCATGCAACCTGTTCCTGCCAATGGAACTACCATTGGAGAGATTATGATGCGAGGTAATTGTGTGATGAAAGGCTACTTGAAAAACCCAAAAGCGAACGAAGAAACCTTTGCGAACGGATGGTTTCACTCTGGAGATCTGGCTGTGAAACACCCTGATGGGTATATAGAAATCAAAGACAGATCAAAGGACATCATCATCTCAGGGGCTGAAAATATCAGCAGTGTTGAGATTGAGAATACTCTGTACTCTCACCCTGCAATACTTGAGGCTTCAGTGGTGGCAAGACCAGATGAGAAATGGGGTGAATCTCCTTGCGCGTTTGTGACATTGAAGCCAGGTGCGGATACTTCTAATCAGCAGCGTCTTGCTGAAGATATAATGAAGTTCTGTAGAGAAAAGATGCCTGCTTATTGGATTCCCAAGTCAGTGTTTTTTGGACCATTACCAAAGACAGCCACTGGGAAGATACAGAAGCATATATTGAGGGCCAAGGCTAAGGAGATGGGTCCCGTCAAGTCGAGCAAGTTGTAA 1698 0.4694 MVGRDIADLPKNAANYTALTPLWFLERAAQVHPTRRSVVHGSCHYTWLQTYQRCRRLASALSLRSVGVGSTVAVIAPNTPALYEAHFGIPMAGAVLNTVNIRLNASTIAFLLGHSSAAVVMVDQELFSLAEEALKIWSEKSKNFKPPMLIVIGDKNCDPKALRDALAKGAIDYEKFLESGDPEFAWKPPEDEWLSIALGYTSGTTASPKGVVLHHRGAYLMSLSGALIWGMNEGAVYLWTLPMFHCNGWCYTWTLAALCGTNICLRQVTARAVYEAIAKYKVTHFCAAPVVLNSIVNARPEETILPLPHVVHVNTAGAAPPPSVLSAMTQRGFRVTHTYGLSETYGPSTVCAWKPEWDSLPPEKQARLHARQGVRYIGLEGLDVINPKTMQPVPANGTTIGEIMMRGNCVMKGYLKNPKANEETFANGWFHSGDLAVKHPDGYIEIKDRSKDIIISGAENISSVEIENTLYSHPAILEASVVARPDEKWGESPCAFVTLKPGADTSNQQRLAEDIMKFCREKMPAYWIPKSVFFGPLPKTATGKIQKHILRAKAKEMGPVKSSKL 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1377 565 Pfam AMP-binding enzyme 25 456 IPR000873 -
Lele23g1377 565 Gene3D - 452 559 IPR045851 -
Lele23g1377 565 SUPERFAMILY Acetyl-CoA synthetase-like 12 556 - -
Lele23g1377 565 FunFam 2,3-dihydroxybenzoate-AMP ligase 451 558 - -
Lele23g1377 565 Pfam AMP-binding enzyme C-terminal domain 465 544 IPR025110 -
Lele23g1377 565 CDD ttLC_FACS_AEE21_like 16 552 - -
Lele23g1377 565 PANTHER ACYL-ACTIVATING ENZYME 10 561 - -
Lele23g1377 565 FunFam Long-chain-fatty-acid--CoA ligase FadD 6 451 - -
Lele23g1377 565 Gene3D - 5 451 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1377 Lele-ChrLele23 18692846 18696488 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1377 4 565 Miscellaneous Gene Families AT3G16910 76.021 0.0 914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g1377 23 18692846 18696488 Lele23g1377 23 18692846 18696488 ECH
Lele21g0661 21 4386219 4390378 Lele23g1377 23 18692846 18696488 hybridization
Lele22g0652 22 4310633 4314287 Lele23g1377 23 18692846 18696488 hybridization