Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0676 ATGAACACAAAGATGGAAACGCCTTCCTTCTTGTTAAGGTTGGCTCTGTTCTTTACCGTTCCGCTTCTAATAACGGCGTCGTCTCAACCACTGTACACGAATTCGCGGTGGATCGTGAAGGAAGACGGCGAGCGCGTAAAGCTAGCGTGTTTGAATTGGGTGTCGCATCTTGAACCCTTACTTGCAGAAGGTCTCAGCAAGCAGCCTGTGGATTTGATCTCCAAACGAATCAAGTCCATGGGATTCAACTGCGTGAGATTCACTTGGCCAATTCTGCTCGTCACCAACTACTCTCTCGCTTCCCTCACCGTCCGGCAGTCCTTCCTCAACCTCGGCCTCCTCGAATCCATAGCCGGCATCCAATCCAATAACCCATCCATCATCGATCTTCCCTTGATCCAAGCTTACCAGTGGGTGGTGGGGAAGATGGGGGAGGAGGATGTGATGGTGATATTGGACAACCACATGACGAAGCCGGAGTGGTGCTGCAGTAACTCCGACGGGAATGGATTCTTCGGCGACCGGGATTTCGACCCTGAGCTGTGGATGGAGGGGCTGACGAAGATGGCTTCGCTGTTCAATGGAGTGAGCAATGTGGTGGGGATGAGCTTAAGGAATGAACTGCGAGGCCCCAAACAAAACGTCAACGATTGGTATAGGTACATGACAAAAGGAGCAGAAGTAGTGCATGCAGCAAACAAGGACGTTCTTGTAATTCTCTCCGGCCTAAATTTCGACAAAGACCTGTCCTTCCTCAAGAATCGACCAGTAAAGCTAACGTTTGAGAGGAAACTAGTCTTCGAAGTACACTGGTACGCCTTCACTGACGGTCAAGCATGGATCCATGGCAACCCAAATCAAGTGTGTGGCCAAGTTTCAGGAAATGTGATGGCACTTTCTGGTTATTTGGTAGAACGAGGTTGGCCCTTGTTTGTGAGCGAGTTTGGTGGCGACTTAAGAGGCACCAACGAGAACGATAATAGGTACTTGAGTTGTTTCTTGGGTTTGGCTGCTGAACATGACTTGGATTGGGCATTATGGACCCTTGTTGGAAGCTATTACCTCAGGCAAGGTGTTGTTGGAATGAATGAGTATTATGGACTTCTCAACTGGGATTGGCGTGATGTCAGGAATTCATCTTTCTTACAGAGGATCTCTGCTCTCCAATCCCCTTTCCAAGGGCCAGGGATATCAGAAGGTAGGCCATATAAAGTAATATTCCATCCATTAACGGGCCTCTGCGTGCAAAGAAAATCACTGATTGAACCATTGACGTTGGGATCCTGCTCTGAAGCTGAAGGCTGGAATTACACACCCCAGAAGATGCTAACAATGAAGGGAACATATTTCTGCTTACAAGCAAATGATTTAGGGATGCCAGCAAAACTAGGCATAATATGCTCAGGGCCTAATTCCAAATGGGACATAATATCAGAATCTAAGATGCACCTCTCGTCAAAACTCACAAATGGTTCTTCTGTTTGTTTAGATGTGGACTCCAACAACATTCTCGTTACCAACACTTGCAAATGCTTGAACAGAGATCCTAACTGCGATCCTGCGAGCCAGTGGTTCAAACTAGTCGACACCACAAGAACAACTTCAATCTCAACGCAATCATTAACTTTACCTGTAGACTCAAATTTACCAGGAATTATCTCTCGCTGGGAATCAGTGAGCTCAATATAA 1689 0.4707 MNTKMETPSFLLRLALFFTVPLLITASSQPLYTNSRWIVKEDGERVKLACLNWVSHLEPLLAEGLSKQPVDLISKRIKSMGFNCVRFTWPILLVTNYSLASLTVRQSFLNLGLLESIAGIQSNNPSIIDLPLIQAYQWVVGKMGEEDVMVILDNHMTKPEWCCSNSDGNGFFGDRDFDPELWMEGLTKMASLFNGVSNVVGMSLRNELRGPKQNVNDWYRYMTKGAEVVHAANKDVLVILSGLNFDKDLSFLKNRPVKLTFERKLVFEVHWYAFTDGQAWIHGNPNQVCGQVSGNVMALSGYLVERGWPLFVSEFGGDLRGTNENDNRYLSCFLGLAAEHDLDWALWTLVGSYYLRQGVVGMNEYYGLLNWDWRDVRNSSFLQRISALQSPFQGPGISEGRPYKVIFHPLTGLCVQRKSLIEPLTLGSCSEAEGWNYTPQKMLTMKGTYFCLQANDLGMPAKLGIICSGPNSKWDIISESKMHLSSKLTNGSSVCLDVDSNNILVTNTCKCLNRDPNCDPASQWFKLVDTTRTTSISTQSLTLPVDSNLPGIISRWESVSSI 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0676 562 Pfam Cellulase (glycosyl hydrolase family 5) 73 349 IPR001547 GO:0004553|GO:0071704
Lele23g0676 562 PANTHER CELLULASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14560) 20 532 - -
Lele23g0676 562 SUPERFAMILY Ricin B-like lectins 400 527 IPR035992 -
Lele23g0676 562 Gene3D Glycosidases 27 390 - -
Lele23g0676 562 SUPERFAMILY (Trans)glycosidases 27 386 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0676 Lele-ChrLele23 5208886 5214199 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0676 28 532 Glycoside Hydrolase AT1G13130 62.083 0.0 656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0676 23 5208886 5214199 Lele23g0676 23 5208886 5214199 ECH