Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0326 ATGGTGGATCAGACCCACGCTCCACTGCCCAGATCCGCCGCGGACCTCTTCTCGGATCCTCTCGATACTCACCCCTTGTGGTTCAAGCCTGCGTCATTTCTATCCCCGGATTTCGATTCTGAATCCTACATTTCGGAGCTCCGTACTTTCGTCCCTTTTGACACTCTTCGCTCTGAGCTCCAGAATTACTTGTCCTCCCTCAATCACGAACTCATCGATCTAATTAATCGTGACTATGCCGATTTCGTAAACTTGAGCACTAAGCTCGTCGATGTGGACGCCGCAGTGGTGCGCATGCGGGCCCCTCTGGTAGAGCTTAGAGATAAAATTGAGCAATTCAGGGGATCTGTAGAAGGTTCGCTCGTGTCCATGAAGAACGGGCTAAGGCAAAGATCCGAGGCAGCATCAGCGAGGGAGACTTTGGAACTTCTTCTGGATACGTTTCACGTGGTATCTAAGGTTGAAAAACTAATAAAGGAGCTACCTAGTGTGCCTACTGATTGGTCAAATGGAGATGTAAATTTGGCGGAGAGAAACTCCACGAGTAATGAGATTTCTGTGCAACATGTTGAGAATGGGACCAGTGTCAGAGAAACTCAAAGCATGCTGCTAGAGAGAATCGCCAGTGAGATGAACCGGCTGAAGTTCTATGTCACACATGCGAAGAACCTGCCTTTTATTGAAAATATGGAGAAGAGGATTCAAAATGCTAGCCTAATATTGGATGTGAGCTTGGGCCATTGCTTTGTAGATGGTCTAGAGCACCGAGACACAACTGCTATATACAATTGCTTACGAGCGTATGCTGCCATTGATAACACCAAGAATGCAGAAGAAATTTTTCGAACCACTATCGTGGCTCCATTGATACAGAAGATTATTCCGCATGGACTTTCAGCCATGGCTGCTGAGTCATCTGCAGATGGACTTGATAGTGATTATGAGCAGATTAAGGAGTGCATTGATAAAGACTGTAAATTTTTATTGAAGATTTCTTCAGCTGAAAATTCTGGTTTGCATGTTTTTGACTTCTTGGCCAATTCAATTCTCAAAGAGGTTTTCTCTGCAATCCAGAAGGGAAAGCCTGGTGCATTTTCTCCTGGAAGACCAACTGAGTTCTTGAAAAATTACAAATCAAGCTTAGATTTCTTGGCTCATCTTGAAGGCTACTGCCCGTCCAGATCTGCTGTTGCTAAATTTCGTTCTCAAGCCATTTATTCTGATTTCATGAAGCAATGGAATATTGGTGTATATTTCTCTCTGAGGTTTCAGGAAATAGCAGGAGCTCTAGATTCTGTGCTTACAACAACCAGTCTTGTCCCTGTTCAAAACTCAGACCCTGGTGAAGCAAACTATCAAAATTTAACACTAAAACAAAGTGTCACTCTATTGGAGAGTTTGAGGTCGTGTTGGAGAGAAGATGTGTTTTTGCTTTCTTGTTCTGACAAGTTCCTCCGCTTAACCTTGCAGCTTCTTGCTAGGTACACTAATTGGTTGTCAACTGGGCTAACTGCTCGTAAAACTGGGAACACGAGCACCAGCCCAGGGTCTGAATGGGCTGTTTCAGCTGCTGCAGATGACTTCATTTTTATTATTCATGATATCAGATGTCTGGAGGAGCAGGTTGATGGTGATTTTCTTCAACATGTGCTTCAAGCTCTATCTTCTTGTTCCTCCAATGTTCTTGAGTTGGTAAGGCGGAGCATTTTACAAGGTGGTCAATCATTGAGAGATTTGAAACCGTTAGTCATCAAAACGGTGGTGGAGTCACTTGTGGAGAAGTCAGTTGAGGACCTGAGACAGATGAAGGGAATAACGGCAACCTACAGGATGACTAATAAACCTCTTCCTGTAAGGCATTCCCCCTATGTTTCTGGGGTATTGCGCCCTCTTAAGGCTTTTCTGGATGGGGAGAGGGCTGCAACATATTTGGCAAGTGAAACCAGAAATAAAGTACTTATAGGTGCTGCAACTGAAATCACTGACCGTTATTACGAATTAGCAGCTGATCTTGTTAGTGTGGCAAGAAAGACAGAGTCTTCACTCCAGAGAATCCGGCAAGGAGCACAACAAAGGCGGGGTGGAGCTAGTTCGGATGTGTCAGATCATAATGTGTCTGACACGGACAAAATCTGTATGCAGTTATTCCTTGACATTCAGGAGTATGCTCGCAACTTGTCTGCTTTGGGGGTTGATGCAGTCAATATACCATCCTATCGTTCATTGTGGCAGTGTGTGGCTCCTGCAGATACGCAAAACACGATGAAGTTTTAA 2274 0.4442 MVDQTHAPLPRSAADLFSDPLDTHPLWFKPASFLSPDFDSESYISELRTFVPFDTLRSELQNYLSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAPLVELRDKIEQFRGSVEGSLVSMKNGLRQRSEAASARETLELLLDTFHVVSKVEKLIKELPSVPTDWSNGDVNLAERNSTSNEISVQHVENGTSVRETQSMLLERIASEMNRLKFYVTHAKNLPFIENMEKRIQNASLILDVSLGHCFVDGLEHRDTTAIYNCLRAYAAIDNTKNAEEIFRTTIVAPLIQKIIPHGLSAMAAESSADGLDSDYEQIKECIDKDCKFLLKISSAENSGLHVFDFLANSILKEVFSAIQKGKPGAFSPGRPTEFLKNYKSSLDFLAHLEGYCPSRSAVAKFRSQAIYSDFMKQWNIGVYFSLRFQEIAGALDSVLTTTSLVPVQNSDPGEANYQNLTLKQSVTLLESLRSCWREDVFLLSCSDKFLRLTLQLLARYTNWLSTGLTARKTGNTSTSPGSEWAVSAAADDFIFIIHDIRCLEEQVDGDFLQHVLQALSSCSSNVLELVRRSILQGGQSLRDLKPLVIKTVVESLVEKSVEDLRQMKGITATYRMTNKPLPVRHSPYVSGVLRPLKAFLDGERAATYLASETRNKVLIGAATEITDRYYELAADLVSVARKTESSLQRIRQGAQQRRGGASSDVSDHNVSDTDKICMQLFLDIQEYARNLSALGVDAVNIPSYRSLWQCVAPADTQNTMKF 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0326 757 MobiDBLite consensus disorder prediction 683 702 - -
Lele23g0326 757 MobiDBLite consensus disorder prediction 683 703 - -
Lele23g0326 757 Pfam COG (conserved oligomeric Golgi) complex component, COG2 26 157 IPR024602 -
Lele23g0326 757 Pfam COG complex component, COG2, C-terminal 590 719 IPR024603 -
Lele23g0326 757 PANTHER CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2 9 754 IPR009316 GO:0007030|GO:0015031|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0326 Lele-ChrLele23 2266621 2272039 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0326 23 2266621 2272039 Lele23g0326 23 2266621 2272039 ECH
Lele21g1685 21 24810889 24816764 Lele23g0326 23 2266621 2272039 hybridization
Lele22g1664 22 22169152 22174676 Lele23g0326 23 2266621 2272039 hybridization