Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0308 ATGCTGCCTCTGCCTCGTCTTGATGTCAACGACGTTAAGGAGAAGCTCTCGTCCCACTTCAGACCTTGGCATCGTTCCTATCAGTTCTGGGTTCGGGCCATTGATATTTACACTGGATATAAGGTGTTCCAACTTAAAGTGAGCTTTGAGAAGGATGCACAGAAGCAGGAAGCATTGTGGGAAAAACAGCATGAGCTTGCTGCGGATAAGATATACTCTATGTGCACAGACCTTGGAGGTTTCTTTCTCAAGGTCGCCCAAATTATAGGGAAGCCTGACCTTGCCCCGGCTGCATGGGTGAGAAGACTGGTTACCCTATGTGATCAGGCTCCTGCAACCCCGTTTCACACTGTTAAACTAGTGCTGGAGAAGGAACTGGGTCGGAATATTGATGATGTGTTTGAAATGTTTGATGTGGAACCTCTTGGATCTGCTTCAATTGCTCAGGTACATAGAGCAAAAGTGAAAGGTGATAAAGATGATGTTGTTGTCAAGGTTCAACATCCTGGAGTTCAGGATCTGATGATGACTGATATCCACAATATGCAAGCTTTTGCTTTATACATGCAAAAGACCGATATCAAATTCGATCTATACTCGGTGACAAAGGAAATGGAAACACAGATTGGATATGAATTTGATTTCATGAGGGAGGCAAGTGCTATGGAAAGGATTAGGAAGTTCCTGTATGAAAACAATAAAAGGACTCCTGTTCTGGTGCCACTAGTAGTACAAAACTTGGTCACTAGGAGAGTCCTAGTTATGGAATATATTGACGGGATTCCAATCATGAATCTTGGTGATGAAATAGCAAAAAGAGGCATTAATCCTCGTGGTAAGCTAGCAGCAGCAGCAAAGCAGAAAATTCTTGAAAGCTTGACTCTAGCATATGGTCAAATGATTTTGAAGAGTGGATTCTTTCATGCAGATCCTCACCCGGGAAACATCCTGATTTGTAAAGGCTCAGAGGTTGCCTTGCTAGACTATGGACAGGTGAAGGATCTCCCAGAAAAGTTGAAGCTTGGTTATGCTAATCTTGTTCTTGCAATTGCTGATGGTGACCCTATAAGAGCATCAGAAAGCTATAGGGAGCTTGGTATAGACACCTTGAGCAATTGTGAAAATGAGCTACAGGAAATGTTAAAACTGGCACAGACCATGTTTGATACAAAACTTCCTCCTGGGGTGGCGATGTTGCAACCTTTCTCAGAGGACTCTTCGATAAAAAAGATTGCTGTTCAGGCTTTTCCTGAAGAACTCTTTTCTGTACTTAGGACAGTGCATCTACTGAGGGGACTTAGTGTTGGTCTCGGAATCAATTATTCATGTGCAGAACAGTGGAGACCCATTGCTGAGGAAGTTTTGTATCAAGCTGGCAGATTTAAAGGTAAGTATGTTAAGCCCAGAAAACGCAGACGAGGTTTTGTAAAAAGATTATTTAGGAGAGACTGA 1452 0.4277 MLPLPRLDVNDVKEKLSSHFRPWHRSYQFWVRAIDIYTGYKVFQLKVSFEKDAQKQEALWEKQHELAADKIYSMCTDLGGFFLKVAQIIGKPDLAPAAWVRRLVTLCDQAPATPFHTVKLVLEKELGRNIDDVFEMFDVEPLGSASIAQVHRAKVKGDKDDVVVKVQHPGVQDLMMTDIHNMQAFALYMQKTDIKFDLYSVTKEMETQIGYEFDFMREASAMERIRKFLYENNKRTPVLVPLVVQNLVTRRVLVMEYIDGIPIMNLGDEIAKRGINPRGKLAAAAKQKILESLTLAYGQMILKSGFFHADPHPGNILICKGSEVALLDYGQVKDLPEKLKLGYANLVLAIADGDPIRASESYRELGIDTLSNCENELQEMLKLAQTMFDTKLPPGVAMLQPFSEDSSIKKIAVQAFPEELFSVLRTVHLLRGLSVGLGINYSCAEQWRPIAEEVLYQAGRFKGKYVKPRKRRRGFVKRLFRRD 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0308 483 SMART serkin_6 136 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g0308 483 PANTHER ABC1 FAMILY PROTEIN 22 461 - -
Lele23g0308 483 SUPERFAMILY Protein kinase-like (PK-like) 110 331 IPR011009 -
Lele23g0308 483 Pfam ABC1 atypical kinase-like domain 106 356 IPR004147 -
Lele23g0308 483 Gene3D Transferase(Phosphotransferase) domain 1 129 345 - -
Lele23g0308 483 ProSiteProfiles Protein kinase domain profile. 136 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g0308 483 CDD ABC1_ADCK3-like 106 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0308 Lele-ChrLele23 2155315 2161968 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0308 23 2155315 2161968 Lele23g0308 23 2155315 2161968 ECH
Lele21g1701 21 24911424 24917666 Lele23g0308 23 2155315 2161968 hybridization
Lele22g1681 22 22269328 22275779 Lele23g0308 23 2155315 2161968 hybridization