Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0243 ATGGCAGAATCAGTGCCAAAGAAGATGGAGTCTGGGCGCTTGATCTGCGATACAGAGATTCCAGTTCTACAGCACAAGATTGACGTCTTTTCTTCTTCTTATCGGAAATCCCTCGAATCACTAAGGGCGAGATCACAAGAAACTGCTCAATATCAAGCTAAATTAGAGGAGGCCAAAGCTAAATTTAGGGAGGCAGAGGATGATTTGGTTAAAGCACTGGGAGTGAAGACTCGCAAAGAGGCCAAGCGTATGGCGTTGATGGAGGCTATTGCTTCTGCAAAGACTAGAGTTGAAGATCTTAAGAGTAGTGTTCGGGAGCAAAGAACCAAGAATAGTGAATATGCTGCAATTTTATCTCAGCATTCTCCTGCATCTGAAGGGACAATGAATGGAAGCACTGAACGGAAAGATGAAATACTGGAGGCCATCTCATGGTACAATACAGTGCTTGACTTTCATGTTGAAGGCGGACATGGGGTGAAGTTCACTTTCAAGAATATCAATGTGAACAATCCCAATGAGGAGTGCTTTTTTACCATCCGTCATGAAAATGATACTTACACACTATTGAGCTGTGAACCCTCCCTCAAAGGAACCAAAGAGTTGATTCATGAATTGAACAAGACAAATGGGCTATTTAAATATGTCAGAGTTATGAGGAGGAAGTTTCAAGAAGCAATAGCACCGGGGGGTGTAGCATCCTTAACTAGTGAACATCAAGAGTCTGCTATTATCTCTACATCTGCGCCAGATCTATCTATCTCATCCTTCAGAAGTGATTCCCCAACCGAGAAAAGTGAGAATCAAGTTCTACCTACAAAAGGGGAGAGACCTTCCAAGAAACAAACCCTCGGAAGACGGGTAATATCTGCTGCTTTGTCTCCTGGATCTACTTCATCAGTCCGCCAGTCTCCTCGTTTGAGGGTATGA 930 0.4344 MAESVPKKMESGRLICDTEIPVLQHKIDVFSSSYRKSLESLRARSQETAQYQAKLEEAKAKFREAEDDLVKALGVKTRKEAKRMALMEAIASAKTRVEDLKSSVREQRTKNSEYAAILSQHSPASEGTMNGSTERKDEILEAISWYNTVLDFHVEGGHGVKFTFKNINVNNPNEECFFTIRHENDTYTLLSCEPSLKGTKELIHELNKTNGLFKYVRVMRRKFQEAIAPGGVASLTSEHQESAIISTSAPDLSISSFRSDSPTEKSENQVLPTKGERPSKKQTLGRRVISAALSPGSTSSVRQSPRLRV 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0243 309 Coils Coil 41 75 - -
Lele23g0243 309 Gene3D Chromosome segregation protein Spc25 131 228 - -
Lele23g0243 309 Pfam Chromosome segregation protein Spc25 156 224 IPR013255 GO:0007059|GO:0031262
Lele23g0243 309 Coils Coil 90 110 - -
Lele23g0243 309 PANTHER KINETOCHORE PROTEIN SPC25-RELATED 6 285 IPR045143 GO:0007059|GO:0031262
Lele23g0243 309 MobiDBLite consensus disorder prediction 253 309 - -
Lele23g0243 309 FunFam Probable kinetochore protein spc25 131 228 - -
Lele23g0243 309 MobiDBLite consensus disorder prediction 253 276 - -
Lele23g0243 309 MobiDBLite consensus disorder prediction 292 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0243 Lele-ChrLele23 1667366 1669429 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0243 23 1667366 1669429 Lele23g0243 23 1667366 1669429 ECH
Lele21g1765 21 25376598 25377342 Lele23g0243 23 1667366 1669429 hybridization
Lele22g1739 22 22729241 22731566 Lele23g0243 23 1667366 1669429 hybridization