Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0167 ATGAAGACGACGAAGGGAGGCAAGGTCATGAACCCCACCGATGCCTACCGCAAGGAGCTTCGTAAGAAGGAATTGAAAAGGAACAAGAAGGAAAGAAAGAAGGTGAGGGAAGTGGGGATTTTGAAGAAGGATCCTGAACAACTTAAAAAGCAGATTGATAACTTGGAAATGATGAAGGCTGATGGTGCTTTGGACAAGGCAAGAAAGCATAAGAAGAGACAGCTTCAGGACACACTTAACCTTGTGTTAAAGAAAAGGAAGGAATATGAAGATAAAATGAAGGAGAAGGGTGAGACCCCGGTTATGTTTAGTCATTTGGGTCTTCCCCGAAGACGAACAACTGCAGAAGAAGAAGAGAGAGTCAATCACCCCAAGCCTGAGGACTCTGTTTACTATCATCCAACACTGAACCCCACTGGGGCTCCACCACCAGGGAAACCTCCCATGTTTAAATCATCTGTAGGACCCAGAATTCCCTTGTCTGGTGCTTCATCAAGTAATGCTGCATCATCGTCAAGGTCAGAATCAGAGGATGATGTGTTAGCTGTTCCTCCTCCTCCCCCACCTCCACCTCCACCTCCACCTCCTTTGCCTGATACTAGCAGTGTTAGCTCAGCTGAAGGCTCAATTTTACCTGATTCTTTGCCTCTACCTCCGCCACCTCCCATGCCACCTAAGCCTGCTACAGCTAATGTGCCTATGTCATTACCCCCACCTCCGTTGCCACCCCCACCTCCTGGACCTCCACCTAAAGAGCTAGTTGCTAACCACCCCATACCCCCTCCACCTCCGCCCCTCCAACAGTCTCAGCCGCCAGTACCTGGAACCAGTGGAAGTGAAGAGAGAAGTCAGTCTTCCTTGTTAGATGATTTATCTTTGGAGGAGCGTGGTCAGGTATCTCTTCCTCCACCGCCTCCACCACCAAGTGGAATGCCAAACTCTGGTGCTAGTCGGTCAGATGATGCTTCTTCTAATGTTGACCATAAAAACACTTTGGCGAGCCAGGAGATCCCCAGAATGGTTCCTGGGCCACCTCCTCCAAGGCAACAGCCTTTAGTTCCAGGACCCACAATAATTCCCACCTTACAGCCCGATGTATTACTATTACCCCCTGGAACATCTCGATTTGCACCACCCCCTCCTGATATGAGACCTCCTTTACCTGCCCCAGGACTCCCAGGTCAAGCACCACCTCCTGGAATGATGGTCCCAATGATTCCAAGGCCACCTTATGGCCCTCCCCCAGGGCCACCTCCAATGATGAGACCTCCACTTCCACCTGGTCCTCCTCCCAGCTTCCAGGAAGAGGATCATGCGGCTATTAGGCCACCACCACCACAGAAACCATCATATGTTAAGTCTGCTGCTTCAACTGTTGTTAAAAGACCACTAGCTCAGCATACTCCAGAACTTACGGCCATGATTCCTGCATCTGTTCGAGTGAGAAGAGAAACTGCAATGCCAAAGCCAAAACCAAAACCATCGCAATCGAACTCTGCAAAAGTTTCTGGAACATCGGCACCAACTGTTGTGAAGTCAGAGTCAGTAAGCTTGTCATCAGCACCAAAAGGACAGAGCATTGATGACTCGTATATGGCTTTCTTAGAGGACATGAAATCCCTTGGAGCACTCGATAGCTGA 1641 0.496 MKTTKGGKVMNPTDAYRKELRKKELKRNKKERKKVREVGILKKDPEQLKKQIDNLEMMKADGALDKARKHKKRQLQDTLNLVLKKRKEYEDKMKEKGETPVMFSHLGLPRRRTTAEEEERVNHPKPEDSVYYHPTLNPTGAPPPGKPPMFKSSVGPRIPLSGASSSNAASSSRSESEDDVLAVPPPPPPPPPPPPPLPDTSSVSSAEGSILPDSLPLPPPPPMPPKPATANVPMSLPPPPLPPPPPGPPPKELVANHPIPPPPPPLQQSQPPVPGTSGSEERSQSSLLDDLSLEERGQVSLPPPPPPPSGMPNSGASRSDDASSNVDHKNTLASQEIPRMVPGPPPPRQQPLVPGPTIIPTLQPDVLLLPPGTSRFAPPPPDMRPPLPAPGLPGQAPPPGMMVPMIPRPPYGPPPGPPPMMRPPLPPGPPPSFQEEDHAAIRPPPPQKPSYVKSAASTVVKRPLAQHTPELTAMIPASVRVRRETAMPKPKPKPSQSNSAKVSGTSAPTVVKSESVSLSSAPKGQSIDDSYMAFLEDMKSLGALDS 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0167 546 MobiDBLite consensus disorder prediction 373 433 - -
Lele23g0167 546 Pfam mRNA biogenesis factor 126 187 - -
Lele23g0167 546 MobiDBLite consensus disorder prediction 110 127 - -
Lele23g0167 546 MobiDBLite consensus disorder prediction 213 271 - -
Lele23g0167 546 MobiDBLite consensus disorder prediction 1 33 - -
Lele23g0167 546 MobiDBLite consensus disorder prediction 181 200 - -
Lele23g0167 546 MobiDBLite consensus disorder prediction 89 526 - -
Lele23g0167 546 MobiDBLite consensus disorder prediction 339 358 - -
Lele23g0167 546 MobiDBLite consensus disorder prediction 272 286 - -
Lele23g0167 546 Pfam WW domain binding protein 11 7 83 IPR019007 GO:0006396
Lele23g0167 546 MobiDBLite consensus disorder prediction 491 526 - -
Lele23g0167 546 Coils Coil 72 92 - -
Lele23g0167 546 PANTHER WW DOMAIN-BINDING PROTEIN 11 2 538 IPR019007 GO:0006396
Lele23g0167 546 Coils Coil 13 33 - -
Lele23g0167 546 MobiDBLite consensus disorder prediction 313 332 - -
Lele23g0167 546 MobiDBLite consensus disorder prediction 158 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0167 Lele-ChrLele23 1059128 1064776 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0167 23 1059128 1064776 Lele23g0167 23 1059128 1064776 ECH
Lele21g1844 21 25945911 25951603 Lele23g0167 23 1059128 1064776 hybridization
Lele22g1818 22 23255817 23261613 Lele23g0167 23 1059128 1064776 hybridization