Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1509 ATGGGCGCGGCCTGCAAAGCGCCACACATTTCTTATCTTCCCTCTCCTCTTCTTGGACGAAACCCCAGATTCTCGATTCAGAGTTGTCATAGTCCCGATTCTAGACGCCAATTCCCAAACAGACGTTTGCTTCTCTTCTCTCTTCCTCTCTATGGTTTCCTTCTCCTTCCTCATAAATTTCAGTCTGCGTCTTCCTATGCCGCCGATCAATTTGATCCTGTTAATCCGGTTGAAAGGGATGCGAGTGCTGTAATATCGCAGAGAATTTCAGAAGCTGTGGAGTTGTTGGAGAAGGGGAGGGAATTACAGGCTCAGGGCGACTTCAATGGCGCTCTTGCCTACTTTACTACGGTTATTGAAAACTACAAAGACTTTGCATTGTCAGACTATGCTAGAGTAGGAAGAGCACTTGCGCTGTATGAGGTTGGTGACAGAGAAGAAGCAATAGCAGAGATGGAAGATGTTTCGCTATCGCTAAAAGGCTATCCGGAAGTCCATGCAGCTCTAGCTGCAGCCTTGTACACGGATAAGCATGCCCCTTTACTTGCTGAAAACCAGTTCACCATTGCGACTCTGCTTGATCCACATTTTTCAGACCTCTCTTATGTCAGAGACAGGAAGCACTGGCCACCAAGTTTGATCAGTTCTCTGCAGCACTTCATTACACTATCCTAG 675 0.4696 MGAACKAPHISYLPSPLLGRNPRFSIQSCHSPDSRRQFPNRRLLLFSLPLYGFLLLPHKFQSASSYAADQFDPVNPVERDASAVISQRISEAVELLEKGRELQAQGDFNGALAYFTTVIENYKDFALSDYARVGRALALYEVGDREEAIAEMEDVSLSLKGYPEVHAALAAALYTDKHAPLLAENQFTIATLLDPHFSDLSYVRDRKHWPPSLISSLQHFITLS 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1509 224 PANTHER EXPRESSED PROTEIN 21 224 - -
Lele22g1509 224 Gene3D Tetratricopeptide repeat domain 86 206 IPR011990 GO:0005515
Lele22g1509 224 SUPERFAMILY TPR-like 83 200 IPR011990 GO:0005515
Lele22g1509 224 Pfam Tetratricopeptide repeat 104 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1509 Lele-ChrLele22 20789369 20791099 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1509 22 20789369 20791099 Lele23g0491 23 3596895 3598421 hybridization
Lele22g1509 22 20789369 20791099 Lele24g1470 24 20554373 20556122 hybridization