Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1770 ATGAGGAAGGAAGCGATCGTGTGTGCGTATGTGGCGGTCAGCGTCATGTCTCTGGTTTCCGTGTGTGGTGCGATCGAGTCTCCACAGTACACAGTGTTTCACCTGGAGTCCGATTTCGAGATCAGGCTCTACAGAGACTCCGTCTGGGTCTCTGCTCCCACCCGCGACATTTCCTTTGAGAAGGCCACCTGGAATGGCTTCCACCGGTTGTTCCAGTACACGCAGGGTGCTAACCTCAACTTCTCTCGAATTGCAATGACTACTCCCTTGCTGACGAGCATAGTACCAGGAGCCGGTCCCTTTCACTCATCAGCCTACTTTGTTCGTTTTTTCTTACCTGTAAAGTTTCAAGCTAATCCACCCCTTCCACTTCCCGAACTGCATATCAAGCCCTATAAATGGGGCATCCACTGTGTAGCCGTCAGAAAGTTCTCCGGATATGCAAGGGATGACAACATTGTAAAGGAGGCAGAAAAACTCGCCATCAGCTTGAGCAGATCTCCATTTGCAAATTCTACTTCTTCCAAGAGTCAACAGGCTTACTCAATTGCCCAATACGATTCTCCCTTGCGGATTTTTGGGCGTACAAATGAGGTTTGGGTTGATATTGATACGCCTAAATTAGCTGGTTGTGAATCGGTTGCCGTCGCTGCATATTGA 660 0.4909 MRKEAIVCAYVAVSVMSLVSVCGAIESPQYTVFHLESDFEIRLYRDSVWVSAPTRDISFEKATWNGFHRLFQYTQGANLNFSRIAMTTPLLTSIVPGAGPFHSSAYFVRFFLPVKFQANPPLPLPELHIKPYKWGIHCVAVRKFSGYARDDNIVKEAEKLAISLSRSPFANSTSSKSQQAYSIAQYDSPLRIFGRTNEVWVDIDTPKLAGCESVAVAAY 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1770 219 SUPERFAMILY Probable bacterial effector-binding domain 15 203 IPR011256 -
Lele21g1770 219 Pfam SOUL heme-binding protein 25 201 IPR006917 -
Lele21g1770 219 Gene3D Regulatory factor, effector binding domain 24 209 IPR011256 -
Lele21g1770 219 FunFam Heme-binding protein 2 25 209 - -
Lele21g1770 219 PANTHER HEME-BINDING PROTEIN-RELATED 14 202 IPR006917 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1770 Lele-ChrLele21 25409911 25411576 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1770 21 25409911 25411576 Lele21g1770 21 25409911 25411576 ECH
Lele21g1770 21 25409911 25411576 Lele23g0236 23 1632668 1634345 hybridization