Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1520 ATGGGTTCCTCCTGCAAAGCGCCACACATTTCTTATCTTCCCTTTCCTCTTCTTGGACGAAACCCCAGATTCATGATTCACAATTGCCACAGTCCCAATTCTAGACGCCAATTCCCAAACAGACGTTTGCTTCTCTTCTCTCTCCCACTCTCTGGTTTCCTTGTCCTTCCTCATAAATTTCAGTCTGCGTCTTCCTATGCCGCCGATCAATTTGATCCTATTACTTCGGTTGAAAGGAGTTCGAGTGCTGTAATATCGCAGAGAATTTCAGAAGCTGTGGATTTGTTGGAGAAGGGGAGGGAATTGCAGGCTCAGGGTGACTTTAATGGCGCTCTTTCCTACTTTACTACGGTTATTGAAAACTACAAAGACTTTGCATTGTCAGACTATGCTAGAGTAGGAAGAGCACTTGCGCTGTATGAGGTTGGTGACAGAGAAGAAGCAATAGCAGAGATGGAAGATGTTTCGATATCGCTAAAAGGCTATCCGGAAGTTCATGCAGCTCTTGCTGCAGCCTTGTACACAGATAAGCATGCTCCTTTACTTGCTGAAATCCAGTTCACCATTGCTACTCTGCTGGATCCACATTTTTCAGACCTCTCTTATGTCAGAGACAGTAAGCACTGGCCACCAAGTTTGATCAGTTCTCTGCAGCACTTCATTACACTATCCTAG 675 0.4504 MGSSCKAPHISYLPFPLLGRNPRFMIHNCHSPNSRRQFPNRRLLLFSLPLSGFLVLPHKFQSASSYAADQFDPITSVERSSSAVISQRISEAVDLLEKGRELQAQGDFNGALSYFTTVIENYKDFALSDYARVGRALALYEVGDREEAIAEMEDVSISLKGYPEVHAALAAALYTDKHAPLLAEIQFTIATLLDPHFSDLSYVRDSKHWPPSLISSLQHFITLS 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1520 224 Gene3D Tetratricopeptide repeat domain 85 208 IPR011990 GO:0005515
Lele21g1520 224 SUPERFAMILY TPR-like 84 199 IPR011990 GO:0005515
Lele21g1520 224 Pfam Tetratricopeptide repeat 104 171 - -
Lele21g1520 224 PANTHER EXPRESSED PROTEIN 27 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1520 Lele-ChrLele21 23460212 23461702 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1520 21 23460212 23461702 Lele23g0491 23 3596895 3598421 hybridization
Lele21g1520 21 23460212 23461702 Lele24g1470 24 20554373 20556122 hybridization