Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0623 ATGGAATCCTCGTCGCCGGAGAAGAAGCTGATCCTCGTCCAGTGCGAGCCAAAAGGCGTCGCTTTGATCACGATCAATCGTCCTGGTTCTCTGAACTCGTTGACCAGGTCGATGATGGCTGACCTGGCTCAAGCATTCAAGAGGCTGGACAGGGATGATTCGGTGCGGGTAATCATATTGACTGGCTCCGGTCGAGCCTTCTGTTCGGGTGTGGACCTGACCGCGGCGGAAGATGTCTTCAAGGGTGACGTGAAGGACGTCGAGTCCGACACGGTCGCGCAAATGGAGCGGTGCCGCAAGCCGATTATCGGGGCCATTAGAGGGTTCGCCGTCACGGCTGGATTCGAGATTGCGCTGGCTTGTGACATGCTGATTGCTTCTAAAGGGGCTAAGTTCATTGATACCCATTCGAGGTTCGGGATTTTTCCTTCATGGGGTCTCTCTCAGAAGCTTTCACGAATTATAGGACCGAATAAAGCTCGTGAAGTATCTCTTACAGCATCTCCTTTGACAGCAGAAGTAGCTGAAAGGCTGGGGCTTGTGAACCATGTTGTTGAAGAAGGTGAAGTATTGAAGAAAGCTCAAGAAATTGCGGGTGCCATTTTAAAAAATAATCAAGACATGTTGTTGAGGTACAAGTCAGTCATAAATGATGGCCTCAAGCTGGACCTTGGGCATGCCCTTTCTCTGGAAAAGGAGAGGGCTCATGAGTATTACAATGGAATGACGAAGGAGCAATTCAGAATGATGCAGGAATTCATAGCAGGTAGAGGTACAAAGAAACAGTCCAAATTGTAG 798 0.495 MESSSPEKKLILVQCEPKGVALITINRPGSLNSLTRSMMADLAQAFKRLDRDDSVRVIILTGSGRAFCSGVDLTAAEDVFKGDVKDVESDTVAQMERCRKPIIGAIRGFAVTAGFEIALACDMLIASKGAKFIDTHSRFGIFPSWGLSQKLSRIIGPNKAREVSLTASPLTAEVAERLGLVNHVVEEGEVLKKAQEIAGAILKNNQDMLLRYKSVINDGLKLDLGHALSLEKERAHEYYNGMTKEQFRMMQEFIAGRGTKKQSKL 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0623 265 SUPERFAMILY ClpP/crotonase 9 257 IPR029045 -
Lele21g0623 265 CDD crotonase-like 19 201 - -
Lele21g0623 265 FunFam probable enoyl-CoA hydratase 1, peroxisomal 8 239 - -
Lele21g0623 265 Gene3D - 2 239 - -
Lele21g0623 265 PANTHER ENOYL-COA HYDRATASE 3 262 - -
Lele21g0623 265 Pfam Enoyl-CoA hydratase/isomerase 18 241 IPR001753 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0623 Lele-ChrLele21 4164229 4166462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0623 18 227 Acyl Lipid Metabolism Gene Families AT1G60550 36.279 4.91e-31 116
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0623 21 4164229 4166462 Lele21g0623 21 4164229 4166462 ECH
Lele21g0623 21 4164229 4166462 Lele23g1417 23 18918384 18920617 hybridization