Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0606 ATGATTATCTCCAGTCCCGTGACTCCTGGTCAGGTTTCGTGCCTGCTTGGAATTATTCCTGTCGTTGCCGCATGGATATATTCGGAGATATTGGAGTATCGGAAAAATTCATTCACTTCCAAAGTTAGGACTTCGGATGTCAATTTGGTTGAAATGAGCAGTAATGCTGTTAAAGAAGAGGATACAGCAGCTTTATTAGAGGGGGGAGCCTTGCAGACTGCCTCTCCAAAAGCTCGAATTTCCACATCACCATTTTTTCGATTCCTTTTGATGGATGAAAGTTTTCTGATTGAAAACCGTTTGACCCTTCGAGCAATGTCTGAATTTGGCCTCCTTTTGGTTTATTTTTATTTGTGTGATCGCACGGATGTGTTTAACTCATCAAAAAAGAGTTACAACAAGGATCTTTTCTGGTTTCTCTATTCCCTCCTCATCATAGTTTCGGCAATGACTTCTTTTAAGATACATCATGACAAGTCTCCGTTCTCTGGAAAATCCATACTTTATTTGAATAGGCACCAGACTGAAGAATGGAAAGGCTGGATGCAGGTTTTGTTTTTAATGTACCATTACTTTGCTGCATCTGAGATCTATAATGCAATTCGTGTGTTCATTGCTGCATATGTCTGGATGACTGGTTTTGGGAACTTCTCATATTATTATGTACGGAAAGATTTTAGTCTTGGAAGGTTTGCTCAGATGATGTGGCGGCTTAATTTCTTGGTGTTGTTCTGCTGTATTGTCCTTAACAACAGTTACATGTTATATTACATCTGTCCTATGCATACCCTTTTCACTCTTATGGTTTATGGGGCACTTGGTATTCTGAACAAGTACAATGAAAATGGGTCAGTTATTGCAGCAAAAATCATTGCTTGCTTCTTGATGGTCATACTAGTATGGGAGATACCTGGAGTATTTGAATGGGTCTGGAGCCCATTTTCTTTCCTGCTTGGTTATACTGATCCTAACCCCGCAAAATCTCACTTTCCTCGTTTACACGAATGGCATTTCCGCTCAGGGCTTGATCGCTACATCTGGATAATTGGAATGATCTATGCTTATTATCATCCAACTGTTGAAAGATGGATGGAGAAATTGGAGGAAATGGAAATCAAGCGTAGAATATCAATCAAAGCAGTTGTTGTGATAATATCTTCACTGGCTGGTTATTTATGGTTCGAGTATATATACAAGATGGACAAGCTTACCTACAACAAATATCATCCATATACCTCATGGATTCCTATAACCGTATACATATGCCTGCGAAATGTTACTCAAAGTTTCCGTGGCTACACTTTGACCCTTTTTGCATGGCTTGGAAAGATCACATTGGAAACCTATATCTCGCAGATCCATATCTGGTTAAGGTCTGGCGTTCCAGATGGTCAACCCAAATTATTGCTTTCTTTAATCCCAGACTACCCAATGTTGAATTTTATGCTCGTTTCTTCTATATACGTTGCAATTTCTTATAGGATCTTTGAACTGACAAATACACTGAAAACGGCGTTTGTACCAAGCAAAGACGATAAACGTCTTGTATCCAACATAGTTACAGCTACAACAATCTCAGTTGTTTTATATTCCTTGTCCTTTGTCTTCCTAAGGTTACCTCAGATGTGGGTTTGA 1635 0.392 MIISSPVTPGQVSCLLGIIPVVAAWIYSEILEYRKNSFTSKVRTSDVNLVEMSSNAVKEEDTAALLEGGALQTASPKARISTSPFFRFLLMDESFLIENRLTLRAMSEFGLLLVYFYLCDRTDVFNSSKKSYNKDLFWFLYSLLIIVSAMTSFKIHHDKSPFSGKSILYLNRHQTEEWKGWMQVLFLMYHYFAASEIYNAIRVFIAAYVWMTGFGNFSYYYVRKDFSLGRFAQMMWRLNFLVLFCCIVLNNSYMLYYICPMHTLFTLMVYGALGILNKYNENGSVIAAKIIACFLMVILVWEIPGVFEWVWSPFSFLLGYTDPNPAKSHFPRLHEWHFRSGLDRYIWIIGMIYAYYHPTVERWMEKLEEMEIKRRISIKAVVVIISSLAGYLWFEYIYKMDKLTYNKYHPYTSWIPITVYICLRNVTQSFRGYTLTLFAWLGKITLETYISQIHIWLRSGVPDGQPKLLLSLIPDYPMLNFMLVSSIYVAISYRIFELTNTLKTAFVPSKDDKRLVSNIVTATTISVVLYSLSFVFLRLPQMWV 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0606 544 Pfam 10 TM Acyl Transferase domain found in Cas1p 102 514 IPR012419 -
Lele21g0606 544 PANTHER N-ACETYLNEURAMINATE 9-O-ACETYLTRANSFERASE 12 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0606 Lele-ChrLele21 4061739 4066848 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0606 21 4061739 4066848 Lele21g0606 21 4061739 4066848 ECH
Lele21g0606 21 4061739 4066848 Lele23g1434 23 19036753 19042408 hybridization
Lele21g0606 21 4061739 4066848 Lele24g0605 24 4038508 4044041 hybridization