Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0116 ATGTCTGCAGCTGTAGGAGCTGTCTCTGCAACCAAAGACACTCCCTTTAATCCTCATTTGGAGGAGGAGCTTAAGAACAATGAAGCCCAAGACACCGAAACAGAGACTGAAGCAGAGGAAGAAGATGACTCCAAGTTGGAGTCTGACAAAGAATTGGACCTTGGCCCTCAATTTTCACTCAAGGAACAGCTTGAGAAAGATAAAGATGACGAAAGTCTAAGAAAATGGAAGGAGAAACTTCTTGGTAGTGTTGATTTATCTGCCATTGGAGAGAGCAAAGAGCCAGAAGTGAAAATAGTGAGCCTCACTATACTATGCCCTGGAAGGCCAGATCTTATCCTGCCAATCCCATTTACTACTGCTCCTAAGAAGTGTCTCTTCATACTCAAGGACGGAAGCAAATACCGGTTGAAATTCACCTTCATTGTCTCTAACAACATCGTTTCTGGCCTCAAATACACAAATGTTGTCTGGAAAACTGGTCTTAGAGTGGACAGTTCAAAAAGAATGCTGGGAACTTTTAGCCCACAGCAGGTTCCGTACACATATGTATTGGAAGAAGAAACTACCCCTTCTGGCTTGTTTGCTAGAGGAAGCTATTCGGCAACAACCAAGTTTGTAGATGACGATGGTAAATGCTACTTGGACGTCAACTACCGCTTTGAAATTCAGAAGAATTGGGCAGCAAAATACTGA 696 0.431 MSAAVGAVSATKDTPFNPHLEEELKNNEAQDTETETEAEEEDDSKLESDKELDLGPQFSLKEQLEKDKDDESLRKWKEKLLGSVDLSAIGESKEPEVKIVSLTILCPGRPDLILPIPFTTAPKKCLFILKDGSKYRLKFTFIVSNNIVSGLKYTNVVWKTGLRVDSSKRMLGTFSPQQVPYTYVLEEETTPSGLFARGSYSATTKFVDDDGKCYLDVNYRFEIQKNWAAKY 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0116 231 Gene3D Coagulation Factor XIII, subunit A, domain 1 49 229 IPR024792 -
Lele21g0116 231 MobiDBLite consensus disorder prediction 1 60 - -
Lele21g0116 231 PRINTS RHO protein GDP dissociation inhibitor signature 87 102 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Lele21g0116 231 PRINTS RHO protein GDP dissociation inhibitor signature 206 223 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Lele21g0116 231 PRINTS RHO protein GDP dissociation inhibitor signature 147 163 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Lele21g0116 231 PRINTS RHO protein GDP dissociation inhibitor signature 164 179 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Lele21g0116 231 PANTHER RHO GDP-DISSOCIATION INHIBITOR 33 228 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Lele21g0116 231 FunFam Rho GDP-dissociation inhibitor 1 50 229 - -
Lele21g0116 231 Pfam RHO protein GDP dissociation inhibitor 39 226 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Lele21g0116 231 SUPERFAMILY E set domains 34 227 IPR014756 -
Lele21g0116 231 MobiDBLite consensus disorder prediction 16 32 - -
Lele21g0116 231 MobiDBLite consensus disorder prediction 33 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0116 Lele-ChrLele21 744750 746000 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0116 21 744750 746000 Lele23g1933 23 22413533 22414783 hybridization
Lele21g0116 21 744750 746000 Lele24g0110 24 704167 705448 hybridization