Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0993 ATGGCAAGCAACCACCCTCGCCAACTGGCAGCCATTCCCCCCAGTAATAAGATGCAGCAAAGAAGAGAACGTAGGATGTTCTCGGCCTCGGATGACACTGCCATGATGAAGCAAGTTCAGGCCACTCATGCCCCAGATGGTCGTGAAGTTGATGTCAAGCCTCTTCTCCAGATCATTGAGGAAATCTTGATTCATGCCATTGCTCGTACCGTTGACGGTGATGTTGATGGAAAAAGAGAACATGTTGATTCTGTGGAGAAGGCTGCTTTCTTTGCTGAGTTGGACATGCTTGATTCCCTGGCCTTTATCATATACAAAATTTCCTGCGAGTTATCTTACAAATGCCTAGGAGGTGGAGATGCACATGCAACAACCATGGGGATCCTGAACATGCTCTCCAGCTATTCATGGCATGCAAAAGTGGTGCTAACTTTATCAGCCTTGTCTGTTAACTTGGGAGAATTTTGGCTGGTTGCTCAGTTGGGTGCTACAAATACACTTGCTAAGTCCGTGGCACTGCTCAAGCAACTGCCTGATCTTGTAGAGAACCATGCCTATCTGAAACAGCAATTTGATACACTGATCAAACTAGTGAAGGCGATTCTGGATGTGACCAGATGTATCGTTGAGTTCAAAGAGCTTCCTACTGAGTACATTTCAGAGGACACTCCTCCAATGTCCGTTGCCAGTGCTCATATTCCTGTTGCTGCTTATTGGACCATCCGGAGTATTGTGGCTTGTGCTTCACAGATTGCAAGTTTTGTAGGACTGAGAAATGAGTACGGCTCAACCACCTCGGAGGCATGGGAACTGTCAAGCTTGGCACATAAGATGAGCAGCATATATGAGCAGCTTCAGAATCAACTGGCCATCTGCTACCAATATATAGATGAGAAGAGGCACATAGAGGCCTTTCGCAATTTGGTTCGTCTTTTTGAGACCGCCCACGTAGACAACCTGAAAATTCTCAGGGCATTGATATATTCCAAGGAAGATCCACCCCCTCTCATAGATGGATCTACCAAAACAAGGGTTAGTCTGGAGGTGCTGAGGAGGAAGCATGTGTTGCTGCTGATATCAGATCTTGATCTGTCACAAGAAGAGATCATAATACTTGATAACTTGTACAAAGATGCACGATCAAGGAGTGAAACGCACTACGAGATGGTATGGATTCCAATTGTGGATGCAGCAGCCTGGAATGAGCTGGCTCGACAGAAGTTTGAACACTTGCTAGCATTGATGCCATGGTACAGCGTGAGGGACCCCATGATTATCGAACCATATGTGATAAAGTATATCAGAGAAGTCTGGAATTTCACAAAGAGAGCCATCTTAGTGGCCCTTGATCCTCAGGGAAGGCTCTCCTCTCCCAATGCCCTCCACATGTACTGGATTTGGGGCAACCTTGCCTTCCCCTTCACTCGTGAGAAAGAAGAATCCTTGTGGAAGGCAGAAATCTGGAGCCTTGAGCTTCTTGTTGATGGCATTGATCCTACAGTTATAGAATGGATGGCAGAAAGCAAATACATATGCCTGTATGGAGGTGAAGATCTTGAGTGGATTCAAACATTCACTAGCACTGCAATGGGTATTGCGAGAGCTAACAACATCTCATTGGAGATGGTTTATGTGGGGAAGAACAACGCGAAAGAGAGGATGCAGAGAATGATAAACACGTTCGCGAACAGAAAGTTCAGCTACTTCTGGCCAAACGTGACGTCGATATGGTTCTTCTGGACAAGACTGGAGAGCATGTTATACTCAAAACTACAGCACGGGAAGACTGTGGAGGGCGACCAGATTATGAGCGAAGTGATGACGGTGCTGAGCTTCGACGGAAGCGATCAAGGGTGGGCCATATTCTGCAGAGGAGCACATGAGATGGCGAGAGCAAAAGGAGACACTGCACTAACATGCCTGAGAGAGTTCGAGAAATGGAAGGAAGCTGCAATAAGAGATGGATTTATTCCGGCCATGAATGAGTTCCTGAAGGAACTTCACACACCACACCACTGTAATCGCCTCATACTTCCAGGGAGCACCGGGGGAATTCCAGAGAAGGTTGTCTGTGCTGAATGTGGGCGTGCAATGGAGAGGTACTTCATGTATCGCTGTTGTGTGGAGTGA 2130 0.4681 MASNHPRQLAAIPPSNKMQQRRERRMFSASDDTAMMKQVQATHAPDGREVDVKPLLQIIEEILIHAIARTVDGDVDGKREHVDSVEKAAFFAELDMLDSLAFIIYKISCELSYKCLGGGDAHATTMGILNMLSSYSWHAKVVLTLSALSVNLGEFWLVAQLGATNTLAKSVALLKQLPDLVENHAYLKQQFDTLIKLVKAILDVTRCIVEFKELPTEYISEDTPPMSVASAHIPVAAYWTIRSIVACASQIASFVGLRNEYGSTTSEAWELSSLAHKMSSIYEQLQNQLAICYQYIDEKRHIEAFRNLVRLFETAHVDNLKILRALIYSKEDPPPLIDGSTKTRVSLEVLRRKHVLLLISDLDLSQEEIIILDNLYKDARSRSETHYEMVWIPIVDAAAWNELARQKFEHLLALMPWYSVRDPMIIEPYVIKYIREVWNFTKRAILVALDPQGRLSSPNALHMYWIWGNLAFPFTREKEESLWKAEIWSLELLVDGIDPTVIEWMAESKYICLYGGEDLEWIQTFTSTAMGIARANNISLEMVYVGKNNAKERMQRMINTFANRKFSYFWPNVTSIWFFWTRLESMLYSKLQHGKTVEGDQIMSEVMTVLSFDGSDQGWAIFCRGAHEMARAKGDTALTCLREFEKWKEAAIRDGFIPAMNEFLKELHTPHHCNRLILPGSTGGIPEKVVCAECGRAMERYFMYRCCVE 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0993 709 Pfam Sieve element occlusion C-terminus 478 707 IPR027944 -
Lele20g0993 709 MobiDBLite consensus disorder prediction 1 22 - -
Lele20g0993 709 MobiDBLite consensus disorder prediction 1 15 - -
Lele20g0993 709 Pfam Sieve element occlusion N-terminus 30 316 IPR027942 -
Lele20g0993 709 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 15 708 IPR039299 GO:0010088
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0993 Lele-ChrLele20 15901057 15903866 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g1100 17 21356931 21357888 Lele20g0993 20 15901057 15903866 hybridization
Lele18g0439 18 2587181 2590001 Lele20g0993 20 15901057 15903866 hybridization