Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0702 ATGGCGGCCTCCAATTCGATATCTGATTGTAATGGGAACAAAAGTGATTACTGCACAACTGTGGTGTTGAACGTCTACGATCTCACTCCTCTTAACAACTACACTTATTGGATTGGATTCGGAATCTTCCACTCCGGCATTGAAGTATATGGCAGAGAGTTTGGGTTTGGAGCGCATGAATTTCCGACAAGTGGAGTTTTTGAAGTGGAGCCAATGAAGTGCCCTGGATTTATATATAGACGTTCCATCACTTTGGGCCAAATAAATATGCATCCTTCAGAGTTTCAGATATTTGTTGAAAATATGGCTTCAGAGTATTATGGGGATACCTATCACCTTGTCTCTAAGAACTGTAATCATTTTACAGATGATCTCTCCCGCAGATTGACTGGAAAGCGGATCCCTGGCTGGGTAAATCGTCTTGCCAAACTAGGAGCTCTTTGTAGCTGCCTGCTTCCTGAAAGCCTTCAAGCATCTAATGTCAAACAACCAATGCCTGAATGCCACGTCAATATGGATGACGACGCTCAGGAAACAGATGATGATCAAGAAATAAATGACAACCAAGAAGAGAAGCACCTTCTTTCGCAGTTGCCTGGACCTGAAGATGTATCTTTTGTTAAAGAGGTCCAAGCAAAATAA 642 0.4237 MAASNSISDCNGNKSDYCTTVVLNVYDLTPLNNYTYWIGFGIFHSGIEVYGREFGFGAHEFPTSGVFEVEPMKCPGFIYRRSITLGQINMHPSEFQIFVENMASEYYGDTYHLVSKNCNHFTDDLSRRLTGKRIPGWVNRLAKLGALCSCLLPESLQASNVKQPMPECHVNMDDDAQETDDDQEINDNQEEKHLLSQLPGPEDVSFVKEVQAK 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0702 213 ProSiteProfiles PPPDE domain profile. 19 156 IPR008580 GO:0008233
Lele20g0702 213 MobiDBLite consensus disorder prediction 168 213 - -
Lele20g0702 213 Pfam PPPDE putative peptidase domain 20 153 IPR008580 GO:0008233
Lele20g0702 213 SMART DUF862_2a 19 157 IPR008580 GO:0008233
Lele20g0702 213 Gene3D PPPDE domains 14 172 IPR042266 -
Lele20g0702 213 PANTHER DESUMOYLATING ISOPEPTIDASE 20 179 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0702 Lele-ChrLele20 14116949 14119106 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0808 17 19557110 19559605 Lele20g0702 20 14116949 14119106 hybridization