Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0428 ATGCTGGTCACATTGCATGCTTCTCTACCCATAAATGCAGGAAGAGCGCTTGAAGAGTTAAGAGCATCTCTTTTTAATGAGTTTCGCTCCTCTGAGGTTGCAAAGCGTCAACAGCAGCGTATTTGTGGTCCTGCTGTTGCGCTTTCCTTCAACTTTTTGGTTGCAGTTGGTATTATTTTCATGAATAAAATGGTGCTTCAAACTGTCAATTTCAGATTTCCTATTTTTCTCACACTAATTCACTATATAGTCAGCTGGTTTTTCATGGCTGTTCTAAAAACGTTCTCTCTCCTCCCTGCATCTCCTTCCTCAAAATCAACTCCAATGTCAAGTTTATTTACTCTTGGATTTGTCATGTCTCTATCAACCGGCCTTGCCAATGTCAGCTTAAAGTATAATAGCATTGGTTTCTATCAGATGGCAAAGATTGCAGTAACACCATCAATAGTTCTGGCTGAATTTGTACTGTATGGGAAGACAGTTTCTATGACCAAGGCTTTAGCGCTCACGGTGGTATCTATTGGTGTTGCCGTGGCTACGGTGACTGATCTGCAGTTCCATGTATTCGGGGCTTGCATAGCATTGGCCTGGATTATACCCAATGCTGTGAACAAAATCCTTTGGTCCAGACTGCAGCAGCAAGAGAACTGGACTGCTTTAGCTTTGATGTGGAAAACAACGCCTGTTACTTTGATTTTCCTGGCTGCTATGTTGCCATGCTTAGATCCTCCGGGTGTGCTTTCCTTCAATTGGAACTTCCAAAACACACTGGTGATTTTTGCATCAGCTATACTTGGATTCTTGCTTCAGTGGTCTGGTGCTTTAGCACTGGGTGCGACATCAGCGATCTCGCATGTTGTTCTTGGACAGTTCAAAACCTGTGTCCTCCTTCTAGGAAATTACTATCTCTTTGGAGCCAGTCCAGGCAAAACCAGTATCTTCGGGGCATTTACAGCAATTGCCGGCATGTCTGTTTACACTTGCCTTAATCTGAAGCCTCAATCAAGCAAGGTGTCCTCACGGCAGTCATCGTCTTTACCAAAATCGAAACTTGGCAAAGAAAACGGATACTCCAAACTGGGCAAAGAAAATGGCAACTCCATTAACGATGGGCATTACGGTGCAGAATCTGTCTAA 1137 0.4354 MLVTLHASLPINAGRALEELRASLFNEFRSSEVAKRQQQRICGPAVALSFNFLVAVGIIFMNKMVLQTVNFRFPIFLTLIHYIVSWFFMAVLKTFSLLPASPSSKSTPMSSLFTLGFVMSLSTGLANVSLKYNSIGFYQMAKIAVTPSIVLAEFVLYGKTVSMTKALALTVVSIGVAVATVTDLQFHVFGACIALAWIIPNAVNKILWSRLQQQENWTALALMWKTTPVTLIFLAAMLPCLDPPGVLSFNWNFQNTLVIFASAILGFLLQWSGALALGATSAISHVVLGQFKTCVLLLGNYYLFGASPGKTSIFGAFTAIAGMSVYTCLNLKPQSSKVSSRQSSSLPKSKLGKENGYSKLGKENGNSINDGHYGAESV 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0428 378 MobiDBLite consensus disorder prediction 337 351 - -
Lele20g0428 378 MobiDBLite consensus disorder prediction 337 378 - -
Lele20g0428 378 PANTHER SOLUTE CARRIER FAMILY 35 47 328 - -
Lele20g0428 378 MobiDBLite consensus disorder prediction 360 378 - -
Lele20g0428 378 Pfam Triose-phosphate Transporter family 51 326 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0428 Lele-ChrLele20 11940563 11944201 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0428 56 351 Organic Solute Cotransporters AT1G77610 23.203 8.30e-20 87.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0521 17 17360852 17365210 Lele20g0428 20 11940563 11944201 hybridization
Lele18g0989 18 6592788 6596523 Lele20g0428 20 11940563 11944201 hybridization