Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0394 ATGGGATTATCGCTTTCCTTACTCATATCAGCCTGGGAAGAGATTGTTCGCCATTCATTATTTGGTCTGTCTTTCAATTTCGGTTTTGCTTCCAAAGATGGGGCTAAGATTCTAAGATCAAGCAGCAGCATAAAGAAAAGAGAATCAGAATCAGACATCACCAGAAATTCAAGCAAGTTGAAGGATCACAGACCTGAAAATGTAATTCTTGAAGAGAACATGAGTTCTGATTCTCTAACAAGAAAAACAGTGCCTATATTATCTCTACCTGAAGAAGTAATTTTCTCTTCCCCAAGACCCATCAGTGAGCTTGATGCTGCTGCAACAAAGCTTCAGAAAGTCTACAAGAGTTACCGTACAAGAAGAAACCTCGCAGACTGCGCTGTGGTGGTGGAGGAACTCTGGTGGAAGGCACTAGACTTTGCTGCCCTCAAAAGGAGTTCTGTTTCCTTCTTTGATGTCCAGAAACATGAAACTGCTGTATCACGGTGGGCAAGGGCAAGGACAAGAGCAGCTAAGGTTGGAAAAGGTTTGTCCAAGGATGAGAAGGCACAAAAACTAGCCCTGCAACATTGGCTTGAAGCTATTGACCCACGTCATAGATATGGTCACAATCTGCACATTTATTATGATGTCTGGTTTGAAAGCCAAAGCACCCAGCCATTTTTCTACTGGTTGGATATTGGGGAAGGCAAAGAAGTAAATCTTCAGAAATGCCCAAGGTCCCCTCTTCAACGCCAATGCATTAAATATCTTGGACCAAAAGAAAGGGAAGAATATGAAGTGATTGTTGAAGGAAGCAAGCTGGTGTATAGACAGAATGGGAAGCTTCTGGATACTGATGATAAGTCCAAATGGATATTTGTTCTGAGCCCCACAAGGTCTTTGTATGTGGGGAGAAAGCAGAAGGGTTCGTTTCAGCATTCTAGCTTCCTGGCTGGAGCTGCAACCACAGCAGCAGGAAGATTAGTGGCTAATCAGGGTGTACTTGAGGCTATTTGGCCCTATAGTGGACACTACCTCCCTACAGAAGAGAACTTCAAAGAATTCATTAGCTTTCTTGAGGAGCACAATGTAGACCTCTCCACTGTTAAGAGATGTTCAATTGATGATGATGCTCCTTCATTCACTGGAACAGCTTCATTCATTGAAAATAATGAAGCACAAGCAGCAAAGGGTCCCACTTCACAACCAGACCTCCCAACTGCAATTGATATCAAAGACAATAATGGCAAGGAGACAACAGATATTGGAGTTACATCAGATAATAAAGGGGATGCAAAAGAGGTTGTTGTTAAAGATGGGGATGACAAGAAGGTTGACTTGTCCAAGAGGTTGTCTCGCAAGTGGTCAACTGGGGCCGGGCCTAGGATTGGGTGTGTTCGGGAATATCCTGGCCACCTGCAGTCAAGAGCATTGGAACAAGTTAATTTGTCACCAAGGCCCAATTCTGCACGCCTGAATAACTACGGCCCAATTCCTTCGCCAAGGCCCAGCCCAAAAGTTAGGATGTCCCCAAGTATTGCTTACATGGGACTGCCCAGTCCCAGTCCAAGGACCCCTATAGCAATAGCAAGTTAA 1581 0.4421 MGLSLSLLISAWEEIVRHSLFGLSFNFGFASKDGAKILRSSSSIKKRESESDITRNSSKLKDHRPENVILEENMSSDSLTRKTVPILSLPEEVIFSSPRPISELDAAATKLQKVYKSYRTRRNLADCAVVVEELWWKALDFAALKRSSVSFFDVQKHETAVSRWARARTRAAKVGKGLSKDEKAQKLALQHWLEAIDPRHRYGHNLHIYYDVWFESQSTQPFFYWLDIGEGKEVNLQKCPRSPLQRQCIKYLGPKEREEYEVIVEGSKLVYRQNGKLLDTDDKSKWIFVLSPTRSLYVGRKQKGSFQHSSFLAGAATTAAGRLVANQGVLEAIWPYSGHYLPTEENFKEFISFLEEHNVDLSTVKRCSIDDDAPSFTGTASFIENNEAQAAKGPTSQPDLPTAIDIKDNNGKETTDIGVTSDNKGDAKEVVVKDGDDKKVDLSKRLSRKWSTGAGPRIGCVREYPGHLQSRALEQVNLSPRPNSARLNNYGPIPSPRPSPKVRMSPSIAYMGLPSPSPRTPIAIAS 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0394 526 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 45 502 IPR044159 -
Lele20g0394 526 MobiDBLite consensus disorder prediction 388 422 - -
Lele20g0394 526 MobiDBLite consensus disorder prediction 480 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0394 Lele-ChrLele20 11685306 11688269 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0489 17 17125825 17128749 Lele20g0394 20 11685306 11688269 hybridization
Lele18g1028 18 6873988 6878055 Lele20g0394 20 11685306 11688269 hybridization