Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0393 ATGGTGACTGGACAACGGTCTGAGTCAGTGAGCAAAGCCCCACTGATTGGGATAAGTCACAGTGCTAGAAACTCAGAAACAGTATCAAAAGGAAGCTCAGTTTCACAGGGATCAGATATGAAATCACCAATGATCATGAAGACAAGAACGTGCTCCTTCATTCTCATGGCTACTCTTCTATCTACAACTTTGGCTCCATTTGAGAACAACAAGCAGCCTCTGTCGCCTTATGCAGCTGCCACTTCACAAGTTGATCAGACAACAGCAAGAACTACAAGAACAAAATTCGTCCCAAATCCAGGTTTTGACTCCAGAAAGGGAAACAAAGGTTATGCAGAAACAGGAAGAGGACTGAGCAGGTTAGGGTCAATACCGCCAAGGTGCGAGCACAAGTGCAGGGGTTGTGTGCCTTGTAATCCAATTCAAATCCCTACAACCACAGGGAGGGTTAGGGTTCAGTATACAAATTACGCGCCAGAAGGGTGGAAATGCAAGTGCGGAACTTCTTATTATAATCCATGA 522 0.4521 MVTGQRSESVSKAPLIGISHSARNSETVSKGSSVSQGSDMKSPMIMKTRTCSFILMATLLSTTLAPFENNKQPLSPYAAATSQVDQTTARTTRTKFVPNPGFDSRKGNKGYAETGRGLSRLGSIPPRCEHKCRGCVPCNPIQIPTTTGRVRVQYTNYAPEGWKCKCGTSYYNP 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0393 173 Pfam Epidermal patterning factor proteins 120 173 - -
Lele20g0393 173 PANTHER EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4 53 173 IPR039455 GO:0010374
Lele20g0393 173 MobiDBLite consensus disorder prediction 78 98 - -
Lele20g0393 173 MobiDBLite consensus disorder prediction 78 116 - -
Lele20g0393 173 MobiDBLite consensus disorder prediction 1 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0393 Lele-ChrLele20 11680016 11682168 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0488 17 17120998 17123234 Lele20g0393 20 11680016 11682168 hybridization
Lele18g1029 18 6881139 6883308 Lele20g0393 20 11680016 11682168 hybridization