Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1052 ATGACCATGAAGAGAAGAACGTGCTCCTTCATTCTCATGGCTCCTCTTCTATTTACAACTTTGGCTTCACTAGTGAACAACAAGACTCTGTCGCCTTATGCAGCTGCCACTTCACAAGTTGATCAGACAACAAGAAGAAGAACAACAAAATTCATCCCAGATCCAGGTTTTGACTCCACAAAGGTACCTATCTGTATCTGTGGAAACGAAGGGTATGCAGAAACAGGAAGAGGACTGAGCAGGTTAGGGTCAATACCGCCAAGGTGTGAGCACAAATGTAGGGGTTGTGTGCCTTGTGATCCAATTCAAATCCCTACAACCACAGGGCGGGTTAGGGTTCAGTATACAAATTACGAACCAGAAGGGTGGAAATGCAAGTGTGGAACTTCTTATTACAGTCCATGA 405 0.4469 MTMKRRTCSFILMAPLLFTTLASLVNNKTLSPYAAATSQVDQTTRRRTTKFIPDPGFDSTKVPICICGNEGYAETGRGLSRLGSIPPRCEHKCRGCVPCDPIQIPTTTGRVRVQYTNYEPEGWKCKCGTSYYSP 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1052 134 Pfam Epidermal patterning factor proteins 81 134 - -
Lele19g1052 134 PANTHER EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4 12 134 IPR039455 GO:0010374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1052 Lele-ChrLele19 6795495 6796172 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0488 17 17120998 17123234 Lele19g1052 19 6795495 6796172 hybridization
Lele18g1029 18 6881139 6883308 Lele19g1052 19 6795495 6796172 hybridization