Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0880 ATGGCCATCGCCATTCAGCAAGCCTTGCTGGAATCAGCTGAATCTATGAAGGACGAACAAACCATTACTCCAACTTCTCTGTGGAGCCAAATTTGGTTGTTTAAAAACCAGACTGTGGAAGCATACAAGAAAAAGCCAGTCACCTATTGGATTCTTCTTGTTCTTAGCATCTTAGCGATGCTCGTAGCATTTCCCGCTTCCAGCCTTCTATCTCGTGTTTATTACTCCAATGGCGGCAAGAGTAAGTGGATCATTTCTTGGGTTGCTGTTGCAGGATGGCCATTAACTGCTTTAATGTTATTCCCTACATACATTGCTCTCAAAACCTTCCCTACTCCTCTGAACTTCAAACTCAATCTGTCTTACACTTTGCTGGGATTCTTAAGTGCTGCTGATAACCTCATGTATGCTTATGCCTACGCATACCTCCCTGCATCTACGGCTTCGCTTGTGGCATCATCATCACTTGTGTTTTCTGCACTTTTCGGATATTTCCTTGTGAAGAACAAACTTAATGCCTCAATCATAAATGCTATTGTTGTTATAACTGCTGGAATGACCATCATAGCCTTGGATTCTAGTTCAGACCGATATGGTAACATCACCGACAGCCAATACATCATGGGATACATTTGGGACATTCTGGGATCTGCTCTTCATGGTCTCATTTTTGCACTCTCAGAACTGGTCTTTATCAGGTTACTACAGAGAAGATCCTTCCATGTTGTGCTAGAGCAGCAAATCATGGTGTCTCTGTTTGCCTTTGTGTTTACCACTATTGGGGTCATAGTGAATGGCGATTTTCAAGAGATGGCGACGGAAGCGAGAGCTTTTAAAGGCGGTAGAACTGCGTATTATCTCGTTCTCATTTGGAGCGCGATCACTTTTCAGTTGGGAGTGCTGGGTGGTACTGCTGTGCTTTTCTTAGCTTCCACTGTGCTAGCTGGTGTGCTGAATGCAGTAAGAACACCCATCACAAGCATTGCTGCTGTTATACTGTTGCATGATCCTATGAGTGGTTTGAAGATCCTCTCTTTGGTTATCACCTTCTGGGGATTCGGCTCATATATATATGGTAGTTCTATGTCTGAGAAGTCATCATGA 1104 0.4348 MAIAIQQALLESAESMKDEQTITPTSLWSQIWLFKNQTVEAYKKKPVTYWILLVLSILAMLVAFPASSLLSRVYYSNGGKSKWIISWVAVAGWPLTALMLFPTYIALKTFPTPLNFKLNLSYTLLGFLSAADNLMYAYAYAYLPASTASLVASSSLVFSALFGYFLVKNKLNASIINAIVVITAGMTIIALDSSSDRYGNITDSQYIMGYIWDILGSALHGLIFALSELVFIRLLQRRSFHVVLEQQIMVSLFAFVFTTIGVIVNGDFQEMATEARAFKGGRTAYYLVLIWSAITFQLGVLGGTAVLFLASTVLAGVLNAVRTPITSIAAVILLHDPMSGLKILSLVITFWGFGSYIYGSSMSEKSS 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0880 367 Pfam Purine nucleobase transmembrane transport 52 365 - -
Lele19g0880 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 96 194 - -
Lele19g0880 367 PANTHER OS09G0467300 PROTEIN-RELATED 41 364 IPR030182 GO:0015211|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0880 Lele-ChrLele19 5351334 5353293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0880 12 353 Organic Solute Cotransporters AT2G24220 72.174 3.80e-157 444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0671 17 18602611 18604406 Lele19g0880 19 5351334 5353293 hybridization
Lele18g0850 18 5346950 5348011 Lele19g0880 19 5351334 5353293 hybridization