Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0828 ATGCATAGTCAGTACGCTTCGAATTCGTTTGGCGTTAGGAGCTACTTGTTTTCCATATTGCGAGATTTTCCTATTTCTAATACTATAAGCCCTAACAGGGACGAGATGAAGGCGTTCTTCTTCATCTTGTTATTTTTCCACGTTTTTAGCCATGTGTTAGCCGAGCAGATCTTCCCAACTCATCTCGGTGGTGGCACATTTGGTCGTAGCTCTCGTGAACCAAAGTACAAGATTGAATTCCATCCCGAAGATGCTCCTTTTCATCCTGATGATGACCAGGAATCTATAGTCATGCCAGATAAAAATGGACAGAAATTTCTATGCTTCCTGCCTAAGGTGGAAAAGGAAAAAAGCGGAAGGCCAGTTATCCAGCACAATATTAGCAGCATGATTGTTGAATCTGAGAAAAGGATTAAACTAAAGACACCAGATGAATTGTTGGAAGTATTAAAGGATCAATGCTTTATCAGACAAGAAGGTTGGTGGTCATATGAATTTTGCTATCAAAAGCAGTTGCGGCAACTACATGTGGAGGATGATAAGGTGGTCCAGGAATTTGTACTGGGAGAGTATGATGAAGAGGCCACTGCTGCCTTTAACCAAAATCTTTCTGACATTTCTACATTGAAGGATCCTCGTTCCCAAGATGCATCTCAAAGGTACCACGCTCACCAATACACGAATGGTACCATATGTGACCTTACAAATAAGCCACGAGAGACAGAGGTCAGGTTCGTATGCTCAGAGCCAAGAGCAATGATTAGTTCTATCACAGAACTTTCCACTTGCAAGTATGCACTCACAATTCAATGCCCTACTTTATGCAGGCACCCATTGTTTCAAGAGGAGAGACCGGTGTCGCACACCATCAACTGTAATGCGCTTCCAAAGGATTACAAGGAAACTAAAGTGGGACAAGACAAAATTGCCGAGATTGTTATGGTCACAGATACAGAAGTTCATGATTCAGAATAA 975 0.4195 MHSQYASNSFGVRSYLFSILRDFPISNTISPNRDEMKAFFFILLFFHVFSHVLAEQIFPTHLGGGTFGRSSREPKYKIEFHPEDAPFHPDDDQESIVMPDKNGQKFLCFLPKVEKEKSGRPVIQHNISSMIVESEKRIKLKTPDELLEVLKDQCFIRQEGWWSYEFCYQKQLRQLHVEDDKVVQEFVLGEYDEEATAAFNQNLSDISTLKDPRSQDASQRYHAHQYTNGTICDLTNKPRETEVRFVCSEPRAMISSITELSTCKYALTIQCPTLCRHPLFQEERPVSHTINCNALPKDYKETKVGQDKIAEIVMVTDTEVHDSE 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0828 324 ProSiteProfiles MRH domain profile. 152 277 IPR044865 -
Lele19g0828 324 FunFam Protein OS-9 homolog 151 271 - -
Lele19g0828 324 Gene3D - 151 271 IPR009011 -
Lele19g0828 324 Pfam Glucosidase II beta subunit-like protein 152 232 IPR012913 -
Lele19g0828 324 PANTHER OS-9-RELATED 43 307 IPR045149 GO:0030433|GO:0030968
Lele19g0828 324 SUPERFAMILY Mannose 6-phosphate receptor domain 217 275 IPR009011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0828 Lele-ChrLele19 4995275 4998293 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0730 17 18993965 18996662 Lele19g0828 19 4995275 4998293 hybridization
Lele18g0791 18 4959780 4962172 Lele19g0828 19 4995275 4998293 hybridization