Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0768 ATGGGCCCGCAGAAATACACGTGTCACATGAACATTTATAAAGCCACGTATATGCATGTGTGTTCCGGATGCAAAACCCGTGTAGTACAAGTAAGAAACTCAGAGAAATTAACCCCATTCACTGTTCGTTCTATTCTCATTCAACACTGTGCGTTTCGTTTTGATTCGAGAGAGAGACCAATGGGGTGCTTCGGAGATGCTGCCGATTCCTTCAAGTCCATTCAACTCAGACAAACTCTAACCCAGCTCGTCAATCTTGGCTTGATTGTGTCATCGGCTCTAATGATATGGAAGGGATTAATGTGTATAACTAGCAGTGAATCACCGGTAGTTGTTGTACTTTCTGAAAGCATGGAACCTGGTTTCAAGAGAGGTGACATTTTGTTTTTGCAAATGAGCAAGGATCCCATTCGCACAGGAGAGATTGTTGTTTACAATATAGACGGACGTCCGATTCCAATTGTTCACCGAGTAATAAAGGTTCATGAACGTCGAGATACAGGAGAAGCTTATATCCTCACCAAAGGGGACAATAACACTGAGGATGACAGGGGTTTGTACAAACGTGGTCAGCATTGGCTGCAGAAGCATCATATAATGGGCAGAGCTGTTGGGTTCTTACCTTATGTTGGTTGGGTGACAATAATGATGACCGAAAAGCCTGTATTGAAGTACATAGTAGTTGGGGCGTTGGGGTTGCTGGTGATAATATCAAAAGATTAA 723 0.4302 MGPQKYTCHMNIYKATYMHVCSGCKTRVVQVRNSEKLTPFTVRSILIQHCAFRFDSRERPMGCFGDAADSFKSIQLRQTLTQLVNLGLIVSSALMIWKGLMCITSSESPVVVVLSESMEPGFKRGDILFLQMSKDPIRTGEIVVYNIDGRPIPIVHRVIKVHERRDTGEAYILTKGDNNTEDDRGLYKRGQHWLQKHHIMGRAVGFLPYVGWVTIMMTEKPVLKYIVVGALGLLVIISKD 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0768 240 TIGRFAM sigpep_I_arch: signal peptidase I 93 236 IPR001733 GO:0006465|GO:0008233|GO:0016020
Lele19g0768 240 ProSitePatterns Signal peptidases I signature 3. 172 185 IPR019758 GO:0004252|GO:0016020
Lele19g0768 240 Pfam Peptidase S24-like 97 204 IPR015927 -
Lele19g0768 240 Gene3D Umud Fragment, subunit A 101 207 - -
Lele19g0768 240 PRINTS Eukaryotic signal peptidase (S26B) family signature 113 128 IPR001733 GO:0006465|GO:0008233|GO:0016020
Lele19g0768 240 PRINTS Eukaryotic signal peptidase (S26B) family signature 172 183 IPR001733 GO:0006465|GO:0008233|GO:0016020
Lele19g0768 240 SUPERFAMILY LexA/Signal peptidase 95 206 IPR036286 -
Lele19g0768 240 CDD S26_SPase_I 109 203 IPR019533 GO:0004252|GO:0006465
Lele19g0768 240 FunFam Signal peptidase complex catalytic subunit SEC11 109 213 - -
Lele19g0768 240 PANTHER SIGNAL PEPTIDASE COMPLEX CATALYTIC SUBUNIT SEC11 75 239 IPR001733 GO:0006465|GO:0008233|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0768 Lele-ChrLele19 4529160 4532034 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0797 17 19484991 19487856 Lele19g0768 19 4529160 4532034 hybridization