Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0757 ATGGCGACCTCCAATTCGACATCTGATGGTAATGGCAACAAAAGTGACTACTGCCCAACTGTGGTGTTGAACGTCTACGATCTCACTCCTCTTAACAACTACACTTATTGGATTGGATTCGGAATCTTCCACTCCGGCATTGAAGTATATGGCAGAGAGTTTGGGTTTGGAGCTCATGAATTTCCGACAAGTGGAGTTTTTGAAGTGGAGCCAAGGAAGTGTCCTGGATTTATATATAGACGTTCCATCACTTTGGGCCAAATAAATATGCATCCTTCAGATTTTCAGATATTTATTGAAACTATGGCTTCAGAGTATTATGGGGACACCTATCACCTTATCTCTAAGAATTGCAATCATTTTACAGATGATCTCTCACGTAGATTGACTGGAAAGAGGATCCCTGGCTGGGTAAATCGTCTTGCCAATCTAGGAGCTCTGTGTAGCTGCCTGCTTCCTGAAAGCCTTCAAGTATCTAATGTCAAACAACCAATGCCTGAATGCTACGTCAATATGGATGATGACGATCAAGAAACAGATGATGATCCAGAAATAAATGACAACCAAGAAGAGAAGCACCTTCTTTCGCTGTTGCCTGGACCTGAAGATGTATCTTTTGTTAAAGAGGTCGAAGCAAAATAG 642 0.4174 MATSNSTSDGNGNKSDYCPTVVLNVYDLTPLNNYTYWIGFGIFHSGIEVYGREFGFGAHEFPTSGVFEVEPRKCPGFIYRRSITLGQINMHPSDFQIFIETMASEYYGDTYHLISKNCNHFTDDLSRRLTGKRIPGWVNRLANLGALCSCLLPESLQVSNVKQPMPECYVNMDDDDQETDDDPEINDNQEEKHLLSLLPGPEDVSFVKEVEAK 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0757 213 MobiDBLite consensus disorder prediction 171 185 - -
Lele19g0757 213 Gene3D PPPDE domains 16 170 IPR042266 -
Lele19g0757 213 Pfam PPPDE putative peptidase domain 20 153 IPR008580 GO:0008233
Lele19g0757 213 ProSiteProfiles PPPDE domain profile. 19 156 IPR008580 GO:0008233
Lele19g0757 213 PANTHER DESUMOYLATING ISOPEPTIDASE 20 176 IPR008580 GO:0008233
Lele19g0757 213 MobiDBLite consensus disorder prediction 170 189 - -
Lele19g0757 213 SMART DUF862_2a 19 157 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0757 Lele-ChrLele19 4453444 4455881 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0808 17 19557110 19559605 Lele19g0757 19 4453444 4455881 hybridization