Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0643 ATGGCATTGTTGGGTATGGGCTCAAATGTGCAATGCAATGCCACAATCCCAGGATATCACTCTAGTAGGGATCTCATCTTTGGCACTGAAGGCAGCACAAGGGCCTCATCTAATAATAACATTGAAATACAGAATGGCCACTTCAACATTGGTTCCTTGCCGGCATCATTACCGGCTCACCATCTAGAATACAGTAAGGAGCTAGTGAAACAGACTATACTCAAGCATGAAGCGATGTTTAAGGAACAAGTTCAAGAGCTGCACCGCCTTTACAACAGACAGAAGGAACTAATGGCTGAAGTCAAAAGGAATTTTGATAAGAATTTGAGTTTGGGGGCATCATGGTCAAGTTCTTTCCCATCTCATGTATCTACTAAAACACCAAACTTGCCATGGTCAATTGGTCAATCATCTACTGTAGCTGCTGGAGGCATCCAGATGTCATTGGGTTCTGGGAAAGAAAACAGCAGGCAAATGAATCCTGCTCCTCCTGCTCTATTTCCAACCGAAGGATGTTGGAAAGATTTTAAACTATCACATTCAGAAAACAGGACAGTTGGCAATAAATTATTGGATCTCCGTCTTCCTGCTGATGAGTACATTGATAGTGAAAAGTCCAAGTCTTTGGAAGATGAAATGGTTTCCAAATTGCCCAGGGTTTCAGCTTATACTTTAGAAGGGGTTTCTCAGGCTGTTTGTAACAGTGATAAGAGACCATATGGAGCTAACTCTAATTGTTTTAGCAATTTAAATGGACTGTTTGAACCCATGAAAGAGGCAACATTGAAGTCTGATGATCTAATGGGCCCTACCAGTCACAAGAAGGGCCCCTTTCATGATATGTCCATGAGAAGAGAATTGTGCGGTCATAATATGTCCAATGATGCATTCTGGAATCCTTACAAACGACAGGATCATGAAGTCTTCTCAGACAACCAACCCTCAGAGAAGGAGAAGAAACAGGAACGACCGTCCTATATGATTAGTGCTGATCAAATTAACCAAGGTCCCTGGAGGGAAGGAAAATTTTCTGGCGGTGAGAGCTCTGTAGGAACAACAAAGGGTCCAATGAGTGCCAGTTTGGTTCAACCGTGTAGTGATCCTTATTGGCTTCTCTCGGGGGCTGATGTGATAAGTTTGAGGATTCCTCCACAAGTTTTTTTGAGAACACCTGGATCTGACACAGTTGAAAACCAAACAACAGTTCAAACACTGCCTCATTTTAGCCCCCCTGCACTCTTTGATCAGAGGTCTAAACCGTTGACAGGATTGCCTGAGCCTACTGGAGATGAATTATACAGGTTGAGAAATACTAAATCTGGCGTTCATTTGGATCACCAAAACTTTCTTCGGAGCAGCTTTTGCAGTGGATCCAAAACACCAGATGCACCATCATTTCTTACCAACAATGTAAACAGCTTTGCCAATCAAAGCTCACTAACCAGCCATGAGCTTAGGAAGCATGCTAAGGATTCTGAAGATGTGGAGACTTCTAATAACATAAACTTAAATGTTATGCCTGCAGATAATTATGAAGCGGCAGCATTTCAAAACGTTAAAGATCTTTTACACAGAGGACTACCCTTTGGAGAAAACAAAATCTCTACCCAAATGGAATCTTTCCCTCTAAAACCTTTTGATTCTGGAACTACACATGGTTTTGAATTAATGATGACTGAGGCAAGAGACTGTAGTAGAAAGAAGATCCATGCATCTGACATTAATGGAGAGCCCAATACTTACTCAGAGCAGCATTCTTTTCATGCTTCCCCCTCCACAGTCTGTCCAGAGCAAACCCCAAACGAAAAGATTGAGGAAACTGAGAAAGGCTGTGTTCCTGATATTGAGTTACCTCGTAATCATGTGCCTGGCTTGGGAGATCAGATAACTGCTGGAGAGAATTTGACAAATAATGAACAGGAGAGAGAACTTAAATGTGGGACAGGTATCATTGACCTAAATATATCCATGAATGAGGATGAGAACTCGCCAGTCGATATTGATTTTCAGGTACCTGTGAGTCCTGAAAACAAGGAATCTTCTCCACCCAGAGGAGAATCTGATGAAAACCAGCTTGAGACTTCGTATCAGTTGTCAGGACAAGAGTGTTCTGGGCTGCAACTAGAGGAAGCCAGACTTGCAGCAGAGGCTTTGGTTTCCATATCAGAATCTGTCTCCCATAATGGACCCCAAATGATCACCTGTCCACCCTCTGAATCGTTCATGAGTAGTCCTCTTCATTGGTTCGCCCGAATTGCGTCCTCGGTGATTAATCATCCAGGGAATGACATTAAGGTAGATTTCACTGGTAATACCAGTGATCATGAGGAGTTTCTGGAACTTCCAGCTGGTATTGATTACTTCGAGGCCATGACCTTAAAGTTGACTGAAACAAAGTCCCTAGACTTCTGTGGAAAGAGCAGTGACCAGAAAGAGGAAGAAGGCGGTTCTACTTCGCCAACTCGGCCAAGGAAGGGATGGACCGGTAAGGGAAAGCGACAGAAGGACTTTCAAAGTGAAATTTTACCAAGTCTGACCTCTTTGTCTAGATTCGAGGTCACTGAGGATCTTCAAACCATAGGGGGTCTAATGGAAGCTGCTGGTGCTCACCCAGAAAGAGTTTCTCTAAGAGGTGCAGTTCGAAATGCATTGACCAGAGGAAGAAGAAGGTCCTCTGCTTCAGTTTCCAATAATACAGACTTGTTAAAGCAGCAGCAGCTAACTAATGGTGTTAAATTGGCCATTGAGAAAAGGAGCTTAATGAGTTGGGGAAAGGGAAATCGAAAGCCTAGGGGAAAGAGGTATCCTGTCAGAAATCCTCAGGTTTTTTGGAGCAAGTATCTTATAACTGAATTCTAA 2859 0.4295 MALLGMGSNVQCNATIPGYHSSRDLIFGTEGSTRASSNNNIEIQNGHFNIGSLPASLPAHHLEYSKELVKQTILKHEAMFKEQVQELHRLYNRQKELMAEVKRNFDKNLSLGASWSSSFPSHVSTKTPNLPWSIGQSSTVAAGGIQMSLGSGKENSRQMNPAPPALFPTEGCWKDFKLSHSENRTVGNKLLDLRLPADEYIDSEKSKSLEDEMVSKLPRVSAYTLEGVSQAVCNSDKRPYGANSNCFSNLNGLFEPMKEATLKSDDLMGPTSHKKGPFHDMSMRRELCGHNMSNDAFWNPYKRQDHEVFSDNQPSEKEKKQERPSYMISADQINQGPWREGKFSGGESSVGTTKGPMSASLVQPCSDPYWLLSGADVISLRIPPQVFLRTPGSDTVENQTTVQTLPHFSPPALFDQRSKPLTGLPEPTGDELYRLRNTKSGVHLDHQNFLRSSFCSGSKTPDAPSFLTNNVNSFANQSSLTSHELRKHAKDSEDVETSNNINLNVMPADNYEAAAFQNVKDLLHRGLPFGENKISTQMESFPLKPFDSGTTHGFELMMTEARDCSRKKIHASDINGEPNTYSEQHSFHASPSTVCPEQTPNEKIEETEKGCVPDIELPRNHVPGLGDQITAGENLTNNEQERELKCGTGIIDLNISMNEDENSPVDIDFQVPVSPENKESSPPRGESDENQLETSYQLSGQECSGLQLEEARLAAEALVSISESVSHNGPQMITCPPSESFMSSPLHWFARIASSVINHPGNDIKVDFTGNTSDHEEFLELPAGIDYFEAMTLKLTETKSLDFCGKSSDQKEEEGGSTSPTRPRKGWTGKGKRQKDFQSEILPSLTSLSRFEVTEDLQTIGGLMEAAGAHPERVSLRGAVRNALTRGRRRSSASVSNNTDLLKQQQLTNGVKLAIEKRSLMSWGKGNRKPRGKRYPVRNPQVFWSKYLITEF 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0643 952 MobiDBLite consensus disorder prediction 333 355 - -
Lele19g0643 952 MobiDBLite consensus disorder prediction 308 327 - -
Lele19g0643 952 PANTHER TRANSCRIPTION FACTOR, PUTATIVE (DUF863)-RELATED 10 936 - -
Lele19g0643 952 MobiDBLite consensus disorder prediction 579 599 - -
Lele19g0643 952 MobiDBLite consensus disorder prediction 406 427 - -
Lele19g0643 952 MobiDBLite consensus disorder prediction 660 701 - -
Lele19g0643 952 Pfam Plant protein of unknown function (DUF863) 138 334 IPR008581 -
Lele19g0643 952 Pfam Plant protein of unknown function (DUF863) 554 936 IPR008581 -
Lele19g0643 952 Coils Coil 84 104 - -
Lele19g0643 952 MobiDBLite consensus disorder prediction 687 701 - -
Lele19g0643 952 MobiDBLite consensus disorder prediction 308 325 - -
Lele19g0643 952 MobiDBLite consensus disorder prediction 805 836 - -
Lele19g0643 952 MobiDBLite consensus disorder prediction 805 819 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0643 Lele-ChrLele19 3693726 3697022 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0921 17 20306142 20309674 Lele19g0643 19 3693726 3697022 hybridization
Lele18g0608 18 3630397 3633667 Lele19g0643 19 3693726 3697022 hybridization