Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0527 ATGGTCGTGCCGGTGGCTAATACATGGGGAGTGAGACAAGCTCTCTCCAGTTCACAACCAAGACCCTTCTCTGGCTCCGATGTCTATCCCAACCCAAAGAAATCAGTCAGCGTCAGTTTCGTTCTTGGTTGGGGCTGTGCTGTTCAAAGCAGGCTATCGATCTTCTCCCGTCGGAACCGCAAGAATTCACAATTCTGTTGCCGTTGTACGACCACCAACCACATCAACGACAGCAGCAACGACAATGGTAATGGTCCTTCTTCTTTGGATTGGGATTGGAATCGATGGAGCCGCCATTTCTCTGAAATTGAACAGGCAGAGAACTTTGCCTCTGTTCTTAAGTTTCAACTTGAAGAGGCGATTGAAAAGGAAGACTTTCAAGAAGCAGCAAAATTAAAAAGGGCTCTATCAGAAGCAACATCAATGGATAGTGTTGCTGAAATCATGTCTCAGTTGAAGAGTGCCATAGATGAAGAGCGATACCATGAGGCTTCAAAATTATCGAGACAATCTGGAAGTAGATTGGTGGGTTGGTGGGTAGGCTACTCCAAAGATTCAGATGACCCCTTTGGCAGAATAATACGTATCAGTCCCAGTATGGGTAGATTTGTTGGAAAGAGTTACAGTCCAGGACAGCTATTCACAGGTTCTCCAGGGACTCCAATTTTTGAAATTTATGTGGTAAAAGACGCTGATGACTCATATCATATGCAGGTGGTGTACTTGCGACGAGTTAAGGGGAATTCAATGAGTAGCTCTCCATCCATGCCTGCGAAAAGTCCGTCCAAACCTGAAGTTGAGAATGATCCTTCAGTTGAAGTGCAGGAACATGAAGAGAAGGTTGAGAGAAGTGATGAGAAAAGAAGTAGTATTGAGGGAGCAACTGAGGAGGGTATTAAAAATGTGATTAATTTTCTCAAAGAAAAAATTCCTGGATTGAAAGTCAAAGTCATGAACATTAATGTTGAAGAGGAAGGGACTGAGGATAATGATCCTGTGAAGCAATTGATGGAGGAAGAGAGTAATAAAACTAACATCAATGAGAATCCTGAAGAGGAAGTTAATAATCTGGATGAACCTGATGAGTTCACTTTACAAGGAGATACTGATGCCTCTGGACATGAAACGGATTTGGATATGAAGCTTTTTATTGGTGGGGTTGTACACAATAATGAAGAAGCTCCTGTCAAAGATCAATTTATGCGTCTTCCAGCTGAAATAAAAGATTCAGAAAGAGATTCTTTTGTGTTGCATATCCCTAGAAGAAATCTAGACTATGATATTAGAGAAAATAAAGTATCCAATGTCAAAGTGGCAGCTGTGGCAACACAAGGAGTCTCAGAGCTTATGCCTCCTGATGTTGCTAAGGCATTTTGGAGTTCCGACAAAGTCTCTTCCAAGGTGTCCAAAAGTGTACGTGAAATTGTCAAACTTGCAATTAACCAAGCACAGAAAAGAAGTAGATTATCTCAATACACGTCTTTCAGTCGGATTGTAACTTCACAAGGGGATTTAGATCCTTTTGATGGACTCTATGTTGGTGCATTTGGACCTTACGGCACTGAAGTGGTGCAATTGAGGCGCAAGTTTGGACACTGGAGTGATCTGGATAAGGAAAACAATTCCTCAGACGTGGAGTTCTTTGAATATGTAGAGGCAGTGAAGTTGACCGGGGATCTTAATGTTCCTGCTGGCCAGGTGACATTTCGTGCTAAAATTGGGAGAGGCAATCGCAACACCAATCGTGGGATGTATCCAGATGAATTAGGAGTGGTGGCAAGTTATAAAGGTCAAGGGAGAATAGCTGACTTTGGCTTTCGAAATCCAAAATGGGTTGATGGAGAATTACTCCAACTTAATGGCAAGGGCATTGGACCATACGTGAAAGGTGCAGATCTTGGTTTCCTTTATGTCGTGCCAGAGCAAAGTTTTCTTGTGATATTTGACCGATTGAAATTACCAGAAGATGGATATGCTACTCTTGTGGATTCTTCTAGAGGAATGAGCATAGTTATGGAATTGGGTTTGCAAGAAGATGCTTTTCTTAAATTTAGTGCTTCAACGATGAAAAAACAATCGTCGAAGAACTCCGAGGCCTCCACTCATGTGGACTCGCCTCACTCCCCGCTTCGGTTCCAATCGCCTCTGCGATCCGAACTGGGCGACCCGCCTGAGTCACCTGAGTTCCGATCGCCCGAGAACTCGCCGGACAACTCTAAAGCCATTGTACCCGTCAGCAAAGCCACTCAATGCTCTCCCGCCAGATCCGCCTTGCCTCCTTCGGACCGCCAGAAGGCGCCGGAGAACGCGCCTCTGGCGAGGTCCTCTGCATCGATGATGATGGTTAATCGGGCCATGAGGGAGGAGCCTCCGCCGTCCGTGACGAAGGTGGGCCCCGCAAGCGGCGTAGGGCGTGCTGGAGATGGTGGTCATGGTAGATCAAGGTCGTCGGCGTCGGCGTCGAGGGAGGAGATGTTGAGGAAGGCGGCGTTAGGGTTTAGGTTGAGTGAGGTTTTGCTTTGCTTGATTTCGTTTTCGGTTATGGCTGCTGATAAAACCCAAGGTTGGAGTGGCGACTCCTTTGATCGCTACAAGGAATACAGGTATTGTTTATCTGTGAATGTTATCGCGTTTGTATATTCGGGATTTCAAGCATGTGATCTGGCCTATCAATTAGTCACCGGAAAAAACATGATCAATCACCATCACCGCTGTCACTTTGATTTCTTCATGGACCAGATTCTGGCATATCTTCTAATATCAGCGTCATCATCGGCAGCCACCCGAGTTGATGATTGGCAATCGAATTGGGGGAAAGACAAGTTCACAGAGATGGCCAGTGCTTCTGTTGGAATGTCGTTTCTGGCTTTCATTGCCTTTGCGTTTAGCTCACTCATCTCCGGCTACAACCTCTGTGGCCGTAGCTCCATTTGA 2934 0.454 MVVPVANTWGVRQALSSSQPRPFSGSDVYPNPKKSVSVSFVLGWGCAVQSRLSIFSRRNRKNSQFCCRCTTTNHINDSSNDNGNGPSSLDWDWNRWSRHFSEIEQAENFASVLKFQLEEAIEKEDFQEAAKLKRALSEATSMDSVAEIMSQLKSAIDEERYHEASKLSRQSGSRLVGWWVGYSKDSDDPFGRIIRISPSMGRFVGKSYSPGQLFTGSPGTPIFEIYVVKDADDSYHMQVVYLRRVKGNSMSSSPSMPAKSPSKPEVENDPSVEVQEHEEKVERSDEKRSSIEGATEEGIKNVINFLKEKIPGLKVKVMNINVEEEGTEDNDPVKQLMEEESNKTNINENPEEEVNNLDEPDEFTLQGDTDASGHETDLDMKLFIGGVVHNNEEAPVKDQFMRLPAEIKDSERDSFVLHIPRRNLDYDIRENKVSNVKVAAVATQGVSELMPPDVAKAFWSSDKVSSKVSKSVREIVKLAINQAQKRSRLSQYTSFSRIVTSQGDLDPFDGLYVGAFGPYGTEVVQLRRKFGHWSDLDKENNSSDVEFFEYVEAVKLTGDLNVPAGQVTFRAKIGRGNRNTNRGMYPDELGVVASYKGQGRIADFGFRNPKWVDGELLQLNGKGIGPYVKGADLGFLYVVPEQSFLVIFDRLKLPEDGYATLVDSSRGMSIVMELGLQEDAFLKFSASTMKKQSSKNSEASTHVDSPHSPLRFQSPLRSELGDPPESPEFRSPENSPDNSKAIVPVSKATQCSPARSALPPSDRQKAPENAPLARSSASMMMVNRAMREEPPPSVTKVGPASGVGRAGDGGHGRSRSSASASREEMLRKAALGFRLSEVLLCLISFSVMAADKTQGWSGDSFDRYKEYRYCLSVNVIAFVYSGFQACDLAYQLVTGKNMINHHHRCHFDFFMDQILAYLLISASSSAATRVDDWQSNWGKDKFTEMASASVGMSFLAFIAFAFSSLISGYNLCGRSSI 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0527 977 MobiDBLite consensus disorder prediction 248 292 - -
Lele19g0527 977 MobiDBLite consensus disorder prediction 692 712 - -
Lele19g0527 977 MobiDBLite consensus disorder prediction 692 776 - -
Lele19g0527 977 Pfam Cyclin D1 binding domain 496 653 - -
Lele19g0527 977 MobiDBLite consensus disorder prediction 731 757 - -
Lele19g0527 977 MobiDBLite consensus disorder prediction 269 292 - -
Lele19g0527 977 Pfam Casparian strip membrane protein domain 825 959 IPR006702 -
Lele19g0527 977 PANTHER PROTEIN EXECUTER 1, CHLOROPLASTIC 54 655 IPR044680 GO:0010343
Lele19g0527 977 Coils Coil 274 294 - -
Lele19g0527 977 MobiDBLite consensus disorder prediction 788 821 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0527 Lele-ChrLele19 3057286 3067313 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g1029 17 20947291 20952358 Lele19g0527 19 3057286 3067313 hybridization
Lele18g0506 18 3004058 3010326 Lele19g0527 19 3057286 3067313 hybridization