Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0460 ATGTGGGGATGGGGCACACGGTGGGGGAAGGAAAGAAGGGAGGACACGTGTGAGGAGTATATGAGGTGGAGGAGGGAGGATGTGCAAGAGGCGAAGATAGAAGCAAAAATGAGAATCGGCCCTGTGTCAGCGTACGGTTGCCGCCACTGTTATGCTTATGCCCGCCCTCTCTTACCCCTTCAACTCCGTCGTCACCCCCACCCCCACCACCGCAACCTCTTTTCCTTTCCTCCTCACCCTTCCTTCCCCATCATCCCCGCCCTCTCCTCCTTCTTTCCTCTTTTACCTAACCCTAATCACTCTCTCTTCTCTGCCACGCAGCAACTCTGGCCCGGGAGTGGCAGCATTAGGAACAAAGCAATGGTGGAGAATTTGCAGCGTTGTGTAATAATAACATCAAATAAGGTGGCACAAGTAATGGAGGCCATCGACAGAGGTTTCTTTGTTCCTGAGGAAATGCTACCTTATGCTGACAGTCCCATGCCGATAGGGCATAATGCCACTATATCTGCTCCTCATATGCATGCCTACTGCCTTCAGTTACTGGAGCAGAACTTACAGCCCGGAATGCGTGTTCTTGACGTTGGCTCTGGATCAGGGTATCTGACGGCGTGCTTCGCTTTGATGGTTGGACACGAAGGGCGTGCCGTGGGAGTGGAGCATATTCCTGAATTGGTTTCTTCTTCAATAGAGAATATCCAGAAGAGTGCAGCGGCTCCTCTATTGAAAGACGGTTCCCTCGCGGTGCATTGTGGGGATGGAAGGCAAGGGTGGGCAGAGTGTGGTCCGTATGATGCAATTCATGTGGGAGCAGCAGCAGAAGAAATCCCAGAAGCACTGATGGAGCAGTTGAATGCAGGAGGCAGAATGGTGATTCCGGTTGGGAACATGTTTCAGGATTTACAGGTCGTCGACAAGAACTCTGATGGTTCTCTCTCCATCCGAACTGAAACTTCTGTTCGTTACGTGCCTCTCACTAGCCCTGACGCTCAACTACGCGGCTACTGA 1008 0.5208 MWGWGTRWGKERREDTCEEYMRWRREDVQEAKIEAKMRIGPVSAYGCRHCYAYARPLLPLQLRRHPHPHHRNLFSFPPHPSFPIIPALSSFFPLLPNPNHSLFSATQQLWPGSGSIRNKAMVENLQRCVIITSNKVAQVMEAIDRGFFVPEEMLPYADSPMPIGHNATISAPHMHAYCLQLLEQNLQPGMRVLDVGSGSGYLTACFALMVGHEGRAVGVEHIPELVSSSIENIQKSAAAPLLKDGSLAVHCGDGRQGWAECGPYDAIHVGAAAEEIPEALMEQLNAGGRMVIPVGNMFQDLQVVDKNSDGSLSIRTETSVRYVPLTSPDAQLRGY 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0460 335 CDD AdoMet_MTases 191 294 - -
Lele19g0460 335 FunFam Protein-L-isoaspartate O-methyltransferase 110 335 - -
Lele19g0460 335 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 117 327 - -
Lele19g0460 335 ProSitePatterns Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 252 267 IPR000682 GO:0004719|GO:0036211
Lele19g0460 335 Gene3D Vaccinia Virus protein VP39 110 335 IPR029063 -
Lele19g0460 335 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 117 305 IPR029063 -
Lele19g0460 335 TIGRFAM pimt: protein-L-isoaspartate O-methyltransferase 117 329 IPR000682 GO:0004719|GO:0036211
Lele19g0460 335 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 116 332 IPR000682 GO:0004719|GO:0036211
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0460 Lele-ChrLele19 2636474 2638267 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g1098 17 21351974 21353833 Lele19g0460 19 2636474 2638267 hybridization
Lele18g0440 18 2592803 2594094 Lele19g0460 19 2636474 2638267 hybridization