Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0459 ATGGCAAGCAGCCACCCTAGCCAACTGGCAGCCATTCCCCCCACCAGTAAGAAGATGCAGCAAAGAAGAGAACGTAGGATGTTCTCGACCTCGGATGACAGTGCCATGATGAAGCAAGTTCAGGCCACTCATGCCCCAGATGGTCGTGAAGTTGATATCAAGCCTGTTCTACAAATCATAGAGGAAATCTTGATTCATGTCATTGCTCGTACCGTTGACGGTGATGTTGATGGAAAAAGAGAACATGTTGATTCTATGGAGAAGGATGCTGTCTTTGCTGAGTTGGACATGCTTGATTCCTTGGCCTTTATCACATACAAAATTTCCTGCGAGTTATCTTACAAGTGCCTAGGAGGTGGAGATGCACATGCAACAACCATGGGGATACTGAACATGCTCTCAAGCTATTCATGGCATGCAAAAGTAGTGCTAACTTTATCAGCCTTGTCTGTGAACTTTGGAGAATTTTGGCTGGTTGCTCAGTTGGGTGCTACAAATACACTTGCTAAATCAGTGGCACTTCTCAAGCAACTTCCTGATCTTGTAGAGAACCATGCCTATCTGAAACAGCAATTTGATACACTCATCAAACTAGTGAAGGCGATTCTGGATGTGACCAGGTGCATCGTTGAGTTCAAAGAGCTTCCCACTGAGTACATTTCAGAGGACACTCCTCCAATGTCCATTGCTAGTGCTCATATTCCTGTTGCTGCTTATTGGACCATCCGAAGTATTGTGGCTTGTACTTCACAGATTGCGAGTCTCGTAGGATTGAGAAATGAGTACGGCTCAACCACCTCAGAGGCATGGGAACTGTCAAGCTTGGCACATAAGATGAGCAGCATACATGAGCAGCTTCAGAATCAACTGGCCATCTGCTACCAATATATAGATGAGAAGAGGCACATAGAGGCCTTTCGCAATTTGGTTCGTCTTTTTGAGACAGCCCACGTAGACAACCTGAAAATTCTCAGGGCATTGATATACGCCAAGGAAGATCCACCCCCTCTTATAGATGGTTCTACCAAAACAAGGGTTAGTCTGGAGGTGCTGAGAAGGAAGCATGTGTTGCTGCTGATATCAGATCTTGATCTGTCACAAGAAGAGATAATAATACTTGATAACTTGTACAAAGACGCAAGATCAAGGAGTGAAACGCACTACGAGATGGTATGGATTCCAGTTGTGGATGCAGTAGCCTGGAATGAGTTGGGTCGACAGAAGTTTGAACATTTGCGAGCATTGATGCCATGGTACAGCGTCAGAGACCCCATGATTATCGAACCATATGTGATAAAGTATATCAGAGAGGTCTGGAATTTCACAAAGAGAGCCATCTTAGTGGCCCTTGATCCTCAGGGAAGGCTCTCCTCTCCCAATGCCCTCCACATGTACTGGATTTGGGGCAACATTGCCTTCCCCTTCACTCGTGAGAAAGAAGAATCCTTGTGGAAGGCAGAAATCTGGAGCCTTGAGCTTCTTGTTGATGGCATTGATCCTACAGTTATAGAATGGATGGCAGAAAGCAAATACATATGCCTGTATGGGGGTGAAGATCTTGAGTGGATTCAAACGTTCACAAGCACTGCAATGGGAGTGGCGAGGGCCAACAACATCTCATTGGAGATGGTTTATGTGGGGAAGAATAACGCCAAAGAGAGGATGCAGAGAATGATAGACACGTTCTCGACAAGAAAGTTCAGCTACTTCTGGCCAAACGTGACTTCCATATGGTTCTTCTGGACAAGACTGGAGAGCATGTTATACTCAAAACTACAGCACGGGAAGACGGTGGAGGGAGACCAGATTATGAGCGAAGTGATGACGGTGCTGAGCTTCGACGGAAGCGATCAAGGGTGGGCTATATTCTGCAGAGGAGCGCATGAAATGGCGAGAGCAAAGGGAGACACTGCACTAACATGCCTGAGAGAGTTCGAGAAGTGGAAGGAAGCTGCAGTAAGAGATGGATTTATTCCAGCCATGAATGAATTCCTGAAGGAACTTCACACACCACATCACTGCAATCGCCTCATACTTCCAGGGACCACAGGGGGAATTCCAGAGAAGGTTGTGTGCGCTGAATGCGGGCGTGCAATGGAGAGGTACTTCATGTATCGCTGTTGTGTGGAGTGA 2133 0.4641 MASSHPSQLAAIPPTSKKMQQRRERRMFSTSDDSAMMKQVQATHAPDGREVDIKPVLQIIEEILIHVIARTVDGDVDGKREHVDSMEKDAVFAELDMLDSLAFITYKISCELSYKCLGGGDAHATTMGILNMLSSYSWHAKVVLTLSALSVNFGEFWLVAQLGATNTLAKSVALLKQLPDLVENHAYLKQQFDTLIKLVKAILDVTRCIVEFKELPTEYISEDTPPMSIASAHIPVAAYWTIRSIVACTSQIASLVGLRNEYGSTTSEAWELSSLAHKMSSIHEQLQNQLAICYQYIDEKRHIEAFRNLVRLFETAHVDNLKILRALIYAKEDPPPLIDGSTKTRVSLEVLRRKHVLLLISDLDLSQEEIIILDNLYKDARSRSETHYEMVWIPVVDAVAWNELGRQKFEHLRALMPWYSVRDPMIIEPYVIKYIREVWNFTKRAILVALDPQGRLSSPNALHMYWIWGNIAFPFTREKEESLWKAEIWSLELLVDGIDPTVIEWMAESKYICLYGGEDLEWIQTFTSTAMGVARANNISLEMVYVGKNNAKERMQRMIDTFSTRKFSYFWPNVTSIWFFWTRLESMLYSKLQHGKTVEGDQIMSEVMTVLSFDGSDQGWAIFCRGAHEMARAKGDTALTCLREFEKWKEAAVRDGFIPAMNEFLKELHTPHHCNRLILPGTTGGIPEKVVCAECGRAMERYFMYRCCVE 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0459 710 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 16 709 IPR039299 GO:0010088
Lele19g0459 710 Pfam Sieve element occlusion C-terminus 479 708 IPR027944 -
Lele19g0459 710 MobiDBLite consensus disorder prediction 1 36 - -
Lele19g0459 710 MobiDBLite consensus disorder prediction 1 15 - -
Lele19g0459 710 Pfam Sieve element occlusion N-terminus 31 317 IPR027942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0459 Lele-ChrLele19 2632520 2635625 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g1100 17 21356931 21357888 Lele19g0459 19 2632520 2635625 hybridization
Lele18g0439 18 2587181 2590001 Lele19g0459 19 2632520 2635625 hybridization