Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g1053 ATGCCTCACCGTCGAGCATCCTCATCGTCTCCGTTTCTGAGCCCACCTCTGCTTATTATTATCTTACCCATTATCGCCCTCCTCTTCCTCTTTATCGCACTTCCTCCTTTTCTCTCCTTCACCTCTCAGCTCCTCCGACCTACTTCCATCAAGAAAAGCTGGGACTCGCTCAATATCTTCTTCGTGCTTTTCGCTATTCTTTGTGGTGTTTTTGCCAAGAGGAATGACGAGGATTTGGCATCGTCGGAAGAGGTGGAAACTGTCAGGGTTAGAGCGGTTGGGTATGAGAAAACAGTGCAACAAGAAGATGGGTCTGTTTCTCGGCAATGGGATGGGTTCTCGGAGAATAAGATTTATGATTCACCTCCGATCATCCGATTGCAGTCGCCGATGACTGGAGTTTTCCGTTTGAGGAGAAGCAGTAGCTCTTACCCCGATCTACGGCAGGAGTCGTTGTGGGAAACTGAAAGTGATAGGTATCGGTATCGTTTCTTTGATGGTTTTGAGATCGACAGGTTTCGGTCACCGGATAGGGAGCAGATTTCGGTGGACAACCTCACGCGGCAGGAAAATGTCGAGGAGAAGGTTGGAGAAGACGCTGATGTGAAGGAAATTCAGGTTGATACCGTCGAAATTCGCAGTTCGTCGCCGCAGCCACCCCAACCGTCCCCTAAGTCACCGACGCCTCCTCCTACTCCTCCGCCAGCTGCTACTCGGCCCAAATCTAGGCGAACATATCACACGGTCCCGCGCAAGGAAAAGATGGAAAATGCGAAGTTCGATGATAATGATACCCCGAGGAATCCTTCTCCGCCACGGCCGCTCCCTCCCCCACCACCGCCTCCGGCGCCGTCGGTCGAAACAGAAGGGGAGCATAAGCGTGGAAGGAATCAACGGAGGAAGAGTAATGTGAAGCGGGAAATAGCAATGGCGTGGGCTTCACTATCCAATCAGAAAAAGATGAAGAGAAAGCAGAGAACAACAACAAAGGTCGATCATATTCACGATGAAGATAATGTCAGTGCCAGCCAGCCGCCACCCCCTCCTCCTCCTCCGTCAGTCTTCCATAGTTGGTTCAAGAAGGGAGTAGGCAAGAACAAGAAAATTCATTCAGTCTCAACGCCTCCACCTCCGGCTCCGCCACCTCCACCACCATTAACATCTTCGAAGCGGTGGTCATTCCGAAAGTCCAAGATCCCACCGCCACCGCCGCCGCCTCCTCCAGCAACTGAACCCCTTCCGCGCAGAAACGCCGGTAGGCCGCCATTATCCACGAGAAAAAGCACTCTCAACAACGAGACATTGCTAAACAGCGGCAATCAATCACCTCTGATCTCCATTCCTCCACCTCCGCCGTTCAAGATCCCGGAGATGAAGTTCACAGTTCGTGGGGATTTTGTGAAGATACGCAGCACTAACAGCTCGCGGTGCGGCTCACCCGAACCCGAAGACCCGAAGTCCAATGAGGACCTACCCGAAATGGAAATGGGTGCGACCATTTCGGGTCCAAGCCACGATGTGGACGTGAAAGCAGCGACTTTCATCGCGAGGCTGAGAGGGGAATGGAAACTGGAGAAGAAAAACTCAATGAAAGAGAAGCAGAACTTGGGCCTTTACTGCCCAGAAGGCCCAATGAGAGGGCCCAGCTCAAGTTCGCACAAAGAAAATATGATTGAAGACAGTAAGAGATCACTTTGA 1698 0.5188 MPHRRASSSSPFLSPPLLIIILPIIALLFLFIALPPFLSFTSQLLRPTSIKKSWDSLNIFFVLFAILCGVFAKRNDEDLASSEEVETVRVRAVGYEKTVQQEDGSVSRQWDGFSENKIYDSPPIIRLQSPMTGVFRLRRSSSSYPDLRQESLWETESDRYRYRFFDGFEIDRFRSPDREQISVDNLTRQENVEEKVGEDADVKEIQVDTVEIRSSSPQPPQPSPKSPTPPPTPPPAATRPKSRRTYHTVPRKEKMENAKFDDNDTPRNPSPPRPLPPPPPPPAPSVETEGEHKRGRNQRRKSNVKREIAMAWASLSNQKKMKRKQRTTTKVDHIHDEDNVSASQPPPPPPPPSVFHSWFKKGVGKNKKIHSVSTPPPPAPPPPPPLTSSKRWSFRKSKIPPPPPPPPPATEPLPRRNAGRPPLSTRKSTLNNETLLNSGNQSPLISIPPPPPFKIPEMKFTVRGDFVKIRSTNSSRCGSPEPEDPKSNEDLPEMEMGATISGPSHDVDVKAATFIARLRGEWKLEKKNSMKEKQNLGLYCPEGPMRGPSSSSHKENMIEDSKRSL 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g1053 565 MobiDBLite consensus disorder prediction 535 565 - -
Lele18g1053 565 MobiDBLite consensus disorder prediction 422 443 - -
Lele18g1053 565 PANTHER COTTON FIBER (DUF761) 2 535 - -
Lele18g1053 565 MobiDBLite consensus disorder prediction 217 238 - -
Lele18g1053 565 MobiDBLite consensus disorder prediction 211 456 - -
Lele18g1053 565 MobiDBLite consensus disorder prediction 397 415 - -
Lele18g1053 565 MobiDBLite consensus disorder prediction 249 263 - -
Lele18g1053 565 MobiDBLite consensus disorder prediction 267 286 - -
Lele18g1053 565 MobiDBLite consensus disorder prediction 470 505 - -
Lele18g1053 565 MobiDBLite consensus disorder prediction 287 306 - -
Lele18g1053 565 MobiDBLite consensus disorder prediction 373 388 - -
Lele18g1053 565 PRINTS Proline rich extensin signature 341 353 - -
Lele18g1053 565 PRINTS Proline rich extensin signature 268 285 - -
Lele18g1053 565 PRINTS Proline rich extensin signature 222 243 - -
Lele18g1053 565 PRINTS Proline rich extensin signature 208 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g1053 Lele-ChrLele18 7120728 7122425 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele18g1053 18 7120728 7122425 Lele19g1085 19 7033024 7034721 hybridization
Lele18g1053 18 7120728 7122425 Lele20g0365 20 11447869 11449644 hybridization